RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 ZNF286BP0CG31 522 aa19.72■□□□□ 0.75
CCDC43-201ENST00000315286 MYBL2P10244 700 aa19.72■□□□□ 0.75
CCDC43-201ENST00000315286 FAM110CQ1W6H9 321 aa19.72■□□□□ 0.75
CCDC43-201ENST00000315286 TSHZ1Q6ZSZ6 1077 aa19.72■□□□□ 0.75
CCDC43-201ENST00000315286 PLEKHH3Q7Z736 793 aa19.72■□□□□ 0.75
CCDC43-201ENST00000315286 ACTRT1Q8TDG2 376 aa19.72■□□□□ 0.75
CCDC43-201ENST00000315286 PTPRHQ9HD43 1115 aa19.72■□□□□ 0.75
CCDC43-201ENST00000315286 PHACTR2O75167 634 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 IQCF3P0C7M6 154 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 ACO1P21399 889 aaKnown RBP19.71■□□□□ 0.75
CCDC43-201ENST00000315286 PROZP22891 400 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 MBTD1Q05BQ5 628 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 CUL2Q13617 745 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 NCOA4Q13772 614 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 ATF7IP2Q5U623 682 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 CST9Q5W186 159 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 C8orf74Q6P047 294 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 FAM212AQ96EL1 285 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 C16orf70Q9BSU1 422 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 ST7Q9NRC1 585 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 TMEM59LQ9UK28 342 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 CPSF3Q9UKF6 684 aaKnown RBP19.71■□□□□ 0.75
CCDC43-201ENST00000315286 NUB1Q9Y5A7 615 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 ATMINO43313 823 aaPredicted RBP19.71■□□□□ 0.75
CCDC43-201ENST00000315286 PPFIA4O75335 1185 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 CST3P01034 146 aaPredicted RBP19.71■□□□□ 0.75
CCDC43-201ENST00000315286 SMPD1P17405 629 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 MPZL3Q6UWV2 235 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 CDR2LQ86X02 465 aaPredicted RBP19.71■□□□□ 0.75
CCDC43-201ENST00000315286 WDR49Q8IV35 697 aa19.71■□□□□ 0.75
CCDC43-201ENST00000315286 GSPT2Q8IYD1 628 aaKnown RBP19.71■□□□□ 0.75
CCDC43-201ENST00000315286 DOCK3Q8IZD9 2030 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 UMODL1Q5DID0 1318 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 DDX3YO15523 660 aaKnown RBP19.7■□□□□ 0.74
CCDC43-201ENST00000315286 GRM1Q13255 1194 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 CASP8Q14790 479 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 GLE1Q53GS7 698 aaKnown RBP19.7■□□□□ 0.74
CCDC43-201ENST00000315286 EEF1DP3Q658K8 133 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 ACAD10Q6JQN1 1059 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 NPLOC4Q8TAT6 608 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 KRT12Q99456 494 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 TINF2Q9BSI4 451 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 UBXN6Q9BZV1 441 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 IFT122Q9HBG6 1241 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 STIM2Q9P246 746 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 PCDHB2Q9Y5E7 798 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 ALG6Q9Y672 507 aa19.7■□□□□ 0.74
CCDC43-201ENST00000315286 ECM2O94769 699 aaPredicted RBP19.69■□□□□ 0.74
CCDC43-201ENST00000315286 CLTAP09496 248 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 MAPK4P31152 587 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 NOP14P78316 857 aaKnown RBP19.69■□□□□ 0.74
CCDC43-201ENST00000315286 CLEC16AQ2KHT3 1053 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 MAP9Q49MG5 647 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 THNSL1Q8IYQ7 743 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 RASGEF1CQ8N431 466 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 LINC01465Q8N7H1 131 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.69■□□□□ 0.74
CCDC43-201ENST00000315286 PGRMC1O00264 195 aaKnown RBP19.69■□□□□ 0.74
CCDC43-201ENST00000315286 MAGEB2O15479 319 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 CSDE1O75534 798 aaKnown RBP19.69■□□□□ 0.74
CCDC43-201ENST00000315286 CYP1A2P05177 515 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 AP3M2P53677 418 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 OSTNP61366 133 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 ACVR2BQ13705 512 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 SMC1AQ14683 1233 aaKnown RBP19.69■□□□□ 0.74
CCDC43-201ENST00000315286 TMEM132AQ24JP5 1023 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 ZNF568Q3ZCX4 644 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 DUSP28Q4G0W2 176 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 CEP120Q8N960 986 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 RUBCNQ92622 972 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 CALR3Q96L12 384 aaKnown RBP19.69■□□□□ 0.74
CCDC43-201ENST00000315286 PPP1R16BQ96T49 567 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 MTMR12Q9C0I1 747 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 ABHD16BQ9H3Z7 469 aa19.69■□□□□ 0.74
CCDC43-201ENST00000315286 NOC2LQ9Y3T9 749 aaKnown RBP19.69■□□□□ 0.74
CCDC43-201ENST00000315286 MGAMO43451 1857 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 A0A087WZ62 844 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 H3BRB1 525 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 MTA2O94776 668 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 CLSTN1O94985 981 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 BPIFB4P59827 614 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 DCAF12L1Q5VU92 463 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 C11orf63Q6NUN7 778 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 ZNF653Q96CK0 615 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 FDXACB1Q9BRP7 624 aaPredicted RBP19.68■□□□□ 0.74
CCDC43-201ENST00000315286 NFKBIZQ9BYH8 718 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 TUT1Q9H6E5 874 aaKnown RBP19.68■□□□□ 0.74
CCDC43-201ENST00000315286 CPA4Q9UI42 421 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 GTF3C4Q9UKN8 822 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 ZHX1Q9UKY1 873 aaPredicted RBP19.68■□□□□ 0.74
CCDC43-201ENST00000315286 PCDHB4Q9Y5E5 795 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 KAT6AQ92794 2004 aa19.68■□□□□ 0.74
CCDC43-201ENST00000315286 TMEM110-MUSTN1A8MSY1 372 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 UNGP13051 313 aaPredicted RBP19.67■□□□□ 0.74
CCDC43-201ENST00000315286 DUOXA2Q1HG44 320 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 TMEM270Q6UE05 265 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 GDAP1L1Q96MZ0 367 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 NUP85Q9BW27 656 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 AP1M1Q9BXS5 423 aa19.67■□□□□ 0.74
CCDC43-201ENST00000315286 PLEKHA4Q9H4M7 779 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms