RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 DSG1Q02413 1049 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 CUL4AQ13619 759 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 BHMT2Q9H2M3 363 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 UTP6Q9NYH9 597 aaKnown RBP16.26■□□□□ 0.19
HCFC1-201ENST00000310441 SOX13Q9UN79 622 aa16.26■□□□□ 0.19
HCFC1-201ENST00000310441 PVALEFA0A1B0GWK0 134 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 MLNP12872 115 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 SCN4BQ8IWT1 228 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 MOV10L1Q9BXT6 1211 aaKnown RBP16.25■□□□□ 0.19
HCFC1-201ENST00000310441 TRABDQ9H4I3 376 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 KRT84Q9NSB2 600 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 TRPC5OSA6NMA1 111 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 CFAP99D6REC4 459 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 CYTH3O43739 400 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 TPI1P60174 286 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 TRIM16LQ309B1 348 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 FAM102AQ5T9C2 384 aaPredicted RBP16.25■□□□□ 0.19
HCFC1-201ENST00000310441 PIGSQ96S52 555 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 SIKE1Q9BRV8 207 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 VPS33BQ9H267 617 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 BCS1LQ9Y276 419 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 POTEFA5A3E0 1075 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 EFNA5P52803 228 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 C6orf10Q5SRN2 563 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 DGKHQ86XP1 1220 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 KCND2Q9NZV8 630 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 ENOPH1Q9UHY7 261 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.25■□□□□ 0.19
HCFC1-201ENST00000310441 TRIM65Q6PJ69 517 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 RNF135Q8IUD6 432 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 TTC30BQ8N4P2 665 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 ANKRD27Q96NW4 1050 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 GEMIN8Q9NWZ8 242 aaKnown RBP16.25■□□□□ 0.19
HCFC1-201ENST00000310441 POLIQ9UNA4 740 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 OSBPL5Q9H0X9 879 aaPredicted RBP16.25■□□□□ 0.19
HCFC1-201ENST00000310441 LGR6Q9HBX8 967 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 CASZ1Q86V15 1759 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 ALBP02768 609 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 TALDO1P37837 337 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 ACCSLQ4AC99 568 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 P3H2Q8IVL5 708 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 PTPRN2Q92932 1015 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 SAMD9Q5K651 1589 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 SLC16A3O15427 465 aaKnown RBP16.25■□□□□ 0.19
HCFC1-201ENST00000310441 PLA2G4AP47712 749 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 ALDH18A1P54886 795 aaKnown RBP16.25■□□□□ 0.19
HCFC1-201ENST00000310441 LINC00523Q86TU6 105 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 ATPAF2Q8N5M1 289 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 ARHGEF26Q96DR7 871 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 C17orf80Q9BSJ5 609 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 PLEKHA5Q9HAU0 1116 aa16.25■□□□□ 0.19
HCFC1-201ENST00000310441 LRRC53A6NM62 1247 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 ERVV-1B6SEH8 477 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 LCORLQ8N3X6 602 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 CCDC126Q96EE4 140 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 PRMT1Q99873 361 aaKnown RBP16.24■□□□□ 0.19
HCFC1-201ENST00000310441 RNF103O00237 685 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 MARK3P27448 753 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 GUCA1AP43080 201 aaPredicted RBP16.24■□□□□ 0.19
HCFC1-201ENST00000310441 SLC44A4Q53GD3 710 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 TTC39BQ5VTQ0 682 aaPredicted RBP16.24■□□□□ 0.19
HCFC1-201ENST00000310441 IZUMO3Q5VZ72 239 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 FAM45BPQ6NSW5 357 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 C3orf20Q8ND61 904 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 ZMYND8Q9ULU4 1186 aaPredicted RBP16.24■□□□□ 0.19
HCFC1-201ENST00000310441 RGS2P41220 211 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 CDH6P55285 790 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 BFSP2Q13515 415 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 SNX17Q15036 470 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 ACADSP16219 412 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 ARHGEF3Q9NR81 526 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 MYO1GB0I1T2 1018 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 PHKA1P46020 1223 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 ARHGAP27Q6ZUM4 889 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 PIDD1Q9HB75 910 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 ITGB1BP2Q9UKP3 347 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 NDUFS3O75489 264 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 KCNJ6P48051 423 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 RMDN3Q96TC7 470 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 DTNAQ9Y4J8 743 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 SRP72O76094 671 aaKnown RBP16.24■□□□□ 0.19
HCFC1-201ENST00000310441 ILF2Q12905 390 aaKnown RBP16.24■□□□□ 0.19
HCFC1-201ENST00000310441 PTK6Q13882 451 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 LRRC8DQ7L1W4 858 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 RAD54LQ92698 747 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 CCT7Q99832 543 aa16.24■□□□□ 0.19
HCFC1-201ENST00000310441 ARHGAP17Q68EM7 881 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 IKBIPQ70UQ0 350 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 PASD1Q8IV76 773 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 ABCB11O95342 1321 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 GFPT1Q06210 699 aaPredicted RBP16.23■□□□□ 0.19
HCFC1-201ENST00000310441 MICALL2Q8IY33 904 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 TTC7AQ9ULT0 858 aaPredicted RBP16.23■□□□□ 0.19
HCFC1-201ENST00000310441 ADGRL3Q9HAR2 1447 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 ENO1P06733 434 aaKnown RBP16.23■□□□□ 0.19
HCFC1-201ENST00000310441 TBL3Q12788 808 aaKnown RBP16.23■□□□□ 0.19
HCFC1-201ENST00000310441 AGBL2Q5U5Z8 902 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 TRIM63Q969Q1 353 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 C6orf203Q9P0P8 240 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms