RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SH3BGRP55822 239 aaPredicted RBP13.31□□□□□ -0.28
USP38-201ENST00000307017 CHI3L2Q15782 390 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 KNOP1Q1ED39 458 aaKnown RBP13.31□□□□□ -0.28
USP38-201ENST00000307017 VPS39Q96JC1 886 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 TMEM47Q9BQJ4 181 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 KRT38O76015 456 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 TRIP10Q15642 601 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 MAPRE1Q15691 268 aaKnown RBP13.3□□□□□ -0.28
USP38-201ENST00000307017 GPATCH4Q5T3I0 446 aaKnown RBP13.3□□□□□ -0.28
USP38-201ENST00000307017 PLA2G4FQ68DD2 849 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 PKN3Q6P5Z2 889 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 COG1Q8WTW3 980 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 CAB39Q9Y376 341 aaPredicted RBP13.3□□□□□ -0.28
USP38-201ENST00000307017 GALNTL6Q49A17 601 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 LLGL2Q6P1M3 1020 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 NLRP10Q86W26 655 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 ZIM3Q96PE6 472 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 ASPSCR1Q9BZE9 553 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 RAB6BQ9NRW1 208 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 LRRC63Q05C16 580 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.3□□□□□ -0.28
USP38-201ENST00000307017 IQCA1LA6NCM1 817 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 C2CD2LO14523 706 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 CPB1P15086 417 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 GLRBP48167 497 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 KLHL38Q2WGJ6 581 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 TBC1D9BQ66K14 1250 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 SCARA3Q6AZY7 606 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 BZW1Q7L1Q6 419 aaKnown RBP13.3□□□□□ -0.28
USP38-201ENST00000307017 SIX5Q8N196 739 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 CCT7Q99832 543 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 ZNF302Q9NR11 478 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 RBAKQ9NYW8 714 aaPredicted RBP13.3□□□□□ -0.28
USP38-201ENST00000307017 HMOX2P30519 316 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 ZNF786Q8N393 782 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 EPS8L3Q8TE67 593 aaKnown RBP13.3□□□□□ -0.28
USP38-201ENST00000307017 SLC40A1Q9NP59 571 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 CD274Q9NZQ7 290 aa13.3□□□□□ -0.28
USP38-201ENST00000307017 WEE2P0C1S8 567 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 IL10P22301 178 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 BCAR1P56945 870 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 CUL4AQ13619 759 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 RHOT2Q8IXI1 618 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 L3MBTL3Q96JM7 780 aaPredicted RBP13.29□□□□□ -0.28
USP38-201ENST00000307017 MAGEB10Q96LZ2 347 aaPredicted RBP13.29□□□□□ -0.28
USP38-201ENST00000307017 SENP2Q9HC62 589 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 HUS1O60921 280 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 KRT8P05787 483 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 NFKBIAP25963 317 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 DNAJC3Q13217 504 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 MAPK11Q15759 364 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 ARHGAP17Q68EM7 881 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 WNK4Q96J92 1243 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 TFE3P19532 575 aaPredicted RBP13.29□□□□□ -0.28
USP38-201ENST00000307017 DDX39BQ13838 428 aaKnown RBP13.29□□□□□ -0.28
USP38-201ENST00000307017 SLC10A5Q5PT55 438 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 SH3BP5LQ7L8J4 393 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 THEM5Q8N1Q8 247 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 ZFYVE1Q9HBF4 777 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 MAGI2Q86UL8 1455 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 ERVV-2B6SEH9 535 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 UBE2Q2LH0YL09 131 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 PYGMP11217 842 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 HDAC4P56524 1084 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 WASHC5Q12768 1159 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 ARHGEF25Q86VW2 580 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 KCNB2Q92953 911 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 CYP4F12Q9HCS2 524 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 STXBP3O00186 592 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 SLC9A1P19634 815 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 CCDC60Q8IWA6 550 aaPredicted RBP13.29□□□□□ -0.28
USP38-201ENST00000307017 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 ZDHHC9Q9Y397 364 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 MORC2Q9Y6X9 1032 aaPredicted RBP13.29□□□□□ -0.28
USP38-201ENST00000307017 MAST1Q9Y2H9 1570 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 CRKP46108 304 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 USP10Q14694 798 aaKnown RBP13.29□□□□□ -0.28
USP38-201ENST00000307017 PABPC5Q96DU9 382 aaKnown RBP13.29□□□□□ -0.28
USP38-201ENST00000307017 DUSP10Q9Y6W6 482 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 RNF123Q5XPI4 1314 aa13.29□□□□□ -0.28
USP38-201ENST00000307017 B2RBV5 119 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 HSPA1AP0DMV8 641 aaKnown RBP13.28□□□□□ -0.28
USP38-201ENST00000307017 HSPA1BP0DMV9 641 aaKnown RBP13.28□□□□□ -0.28
USP38-201ENST00000307017 ZBTB46Q86UZ6 589 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 HORMAD1Q86X24 394 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 MTERF3Q96E29 417 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 NDEL1Q9GZM8 345 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 STAP2Q9UGK3 403 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 TBC1D4O60343 1298 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 HSMCR30P0CW71 290 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 SDC4P31431 198 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 KCTD21Q4G0X4 260 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 USP13Q92995 863 aaPredicted RBP13.28□□□□□ -0.28
USP38-201ENST00000307017 SH3GL1Q99961 368 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 SCARF1Q14162 830 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 C3orf62Q6ZUJ4 267 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 METTL16Q86W50 562 aaKnown RBP13.28□□□□□ -0.28
USP38-201ENST00000307017 CNPY4Q8N129 248 aa13.28□□□□□ -0.28
USP38-201ENST00000307017 IPMKQ8NFU5 416 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms