RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RGS20O76081 388 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 TWF2Q6IBS0 349 aaKnown RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 MARCH10Q8NA82 808 aaPredicted RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 APOL5Q9BWW9 433 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 WDR11Q9BZH6 1224 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 UBE2OQ9C0C9 1292 aaKnown RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 DHX35Q9H5Z1 703 aaKnown RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 POLR1BQ9H9Y6 1135 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 CHI3L1P36222 383 aaPredicted RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 LRRC71Q8N4P6 559 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 RNFT2Q96EX2 444 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 MORC2Q9Y6X9 1032 aaPredicted RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 PNMA6EA0A0J9YXQ4 647 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 ARHGEF6Q15052 776 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 ASPRV1Q53RT3 343 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 POMGNT2Q8NAT1 580 aa14.06□□□□□ -0.16
TRIM56-201ENST00000306085 PCF11O94913 1555 aaKnown RBP14.06□□□□□ -0.16
TRIM56-201ENST00000306085 PGK2P07205 417 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 SLC16A2P36021 539 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 OTUD4Q01804 1114 aaKnown RBP14.05□□□□□ -0.16
TRIM56-201ENST00000306085 OSBPL9Q96SU4 736 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 TAF1DQ9H5J8 278 aaPredicted RBP14.05□□□□□ -0.16
TRIM56-201ENST00000306085 ZNF304Q9HCX3 659 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 EIF4G3O43432 1585 aaKnown RBP14.05□□□□□ -0.16
TRIM56-201ENST00000306085 KCNN4O15554 427 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 GUCY1B2O75343 617 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 FOXP1Q9H334 677 aaPredicted RBP14.05□□□□□ -0.16
TRIM56-201ENST00000306085 HUS1O60921 280 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 CCNIQ14094 377 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 CATSPER4Q7RTX7 472 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 MTMR6Q9Y217 621 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 NFICP08651 508 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 HIST1H2AGP0C0S8 130 aaPredicted RBP14.05□□□□□ -0.16
TRIM56-201ENST00000306085 HIST1H2ADP20671 130 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 ZNF790Q6PG37 636 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 KIF2BQ8N4N8 673 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 HIST1H2AHQ96KK5 128 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 HIST1H2AJQ99878 128 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 H2AFJQ9BTM1 129 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 PTH1RQ03431 593 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 SEC16BQ96JE7 1060 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 SNTNA6NMZ2 147 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 BTN3A3O00478 584 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 ADORA2BP29275 332 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 SDC4P31431 198 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 TFDP2Q14188 446 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 IKBIPQ70UQ0 350 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 LCMT1Q9UIC8 334 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 EVPLLA8MZ36 301 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 IKBKBO14920 756 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 ZBTB39O15060 712 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 EIF2S3P41091 472 aaKnown RBP14.05□□□□□ -0.16
TRIM56-201ENST00000306085 CCDC137Q6PK04 289 aaKnown RBP14.05□□□□□ -0.16
TRIM56-201ENST00000306085 LAYNQ6UX15 382 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 MOSPD2Q8NHP6 518 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 ZC3H4Q9UPT8 1303 aaKnown RBP14.05□□□□□ -0.16
TRIM56-201ENST00000306085 PCMTD2Q9NV79 361 aa14.05□□□□□ -0.16
TRIM56-201ENST00000306085 RPN2P04844 631 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 LRRC63Q05C16 580 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 ULK3Q6PHR2 472 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 ENKURQ8TC29 256 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 FAM153AQ9UHL3 310 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 PRIM2P49643 509 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 CTCFP49711 727 aaPredicted RBP14.04□□□□□ -0.16
TRIM56-201ENST00000306085 RAD51Q06609 339 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 SIX5Q8N196 739 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 C1orf54Q8WWF1 131 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 TSPAN17Q96FV3 270 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 BATF3Q9NR55 127 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 APPL1Q9UKG1 709 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 STX7O15400 261 aaKnown RBP14.04□□□□□ -0.16
TRIM56-201ENST00000306085 CDC25AP30304 524 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 KIF24Q5T7B8 1368 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 FBXO31Q5XUX0 539 aaPredicted RBP14.04□□□□□ -0.16
TRIM56-201ENST00000306085 ROGDIQ9GZN7 287 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 ARHGEF38Q9NXL2 777 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 ATP6V1HQ9UI12 483 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 BCS1LQ9Y276 419 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 PSMC3P17980 439 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 RRM2P31350 389 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 GPC5P78333 572 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 C12orf60Q5U649 245 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 ZNF57Q68EA5 555 aaPredicted RBP14.04□□□□□ -0.16
TRIM56-201ENST00000306085 TJP2Q9UDY2 1190 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 SH3GLB1Q9Y371 365 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 LCP1P13796 627 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 SERPINH1P50454 418 aaKnown RBP14.04□□□□□ -0.16
TRIM56-201ENST00000306085 FUT11Q495W5 492 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 ARHGAP27Q6ZUM4 889 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 TERB1Q8NA31 727 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 KCNK16Q96T55 309 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 HERC5Q9UII4 1024 aaKnown RBP14.04□□□□□ -0.16
TRIM56-201ENST00000306085 BCAR1P56945 870 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 PGBD3Q8N328 593 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 ECSITQ9BQ95 431 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 PARNO95453 639 aaKnown RBP14.04□□□□□ -0.16
TRIM56-201ENST00000306085 HOXA13P31271 388 aaPredicted RBP14.04□□□□□ -0.16
TRIM56-201ENST00000306085 KLHL1Q9NR64 748 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 IARS2Q9NSE4 1012 aaKnown RBP14.04□□□□□ -0.16
TRIM56-201ENST00000306085 IQCMA0A1B0GVH7 501 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms