RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 WEE2P0C1S8 567 aa9.86□□□□□ -0.83
PTPRE-202ENST00000306042 LGSNQ5TDP6 509 aa9.86□□□□□ -0.83
PTPRE-202ENST00000306042 ZNF449Q6P9G9 518 aa9.86□□□□□ -0.83
PTPRE-202ENST00000306042 LRRC8AQ8IWT6 810 aa9.86□□□□□ -0.83
PTPRE-202ENST00000306042 C7orf61Q8IZ16 206 aa9.86□□□□□ -0.83
PTPRE-202ENST00000306042 SPON2Q9BUD6 331 aa9.86□□□□□ -0.83
PTPRE-202ENST00000306042 CELF4Q9BZC1 486 aaKnown RBP9.86□□□□□ -0.83
PTPRE-202ENST00000306042 ACKR2O00590 384 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 CYB561D2O14569 222 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 HEXIM1O94992 359 aaKnown RBP9.85□□□□□ -0.83
PTPRE-202ENST00000306042 SLC10A3P09131 477 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 RBBP8NLQ8NC74 664 aaPredicted RBP9.85□□□□□ -0.83
PTPRE-202ENST00000306042 APEX2Q9UBZ4 518 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 SLC4A7Q9Y6M7 1214 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 CYP26A1O43174 497 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 STAMBPO95630 424 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 ITGB5P18084 799 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 LLGL1Q15334 1064 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 INPP4AQ96PE3 977 aaPredicted RBP9.85□□□□□ -0.83
PTPRE-202ENST00000306042 MED15Q96RN5 788 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 ZCCHC17Q9NP64 241 aaKnown RBP9.85□□□□□ -0.83
PTPRE-202ENST00000306042 RAB23Q9ULC3 237 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 GOLGA8CPA6NN73 597 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 CREB3O43889 395 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 FAM200BP0CF97 657 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 HSPA6P17066 643 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 AKAP5P24588 427 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 KLRC2P26717 231 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 CDC25BP30305 580 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 RGS7P49802 495 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 GPC5P78333 572 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 TDRD10Q5VZ19 366 aaKnown RBP9.85□□□□□ -0.83
PTPRE-202ENST00000306042 DARS2Q6PI48 645 aaKnown RBP9.85□□□□□ -0.83
PTPRE-202ENST00000306042 ARHGEF18Q6ZSZ5 1173 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 EMILIN2Q9BXX0 1053 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.85□□□□□ -0.83
PTPRE-202ENST00000306042 V9GYY5 206 aaPredicted RBP9.85□□□□□ -0.83
PTPRE-202ENST00000306042 MOXD2PA6NHM9 499 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 ATP9AO75110 1047 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 MMP3P08254 477 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 SSTR3P32745 418 aaPredicted RBP9.85□□□□□ -0.83
PTPRE-202ENST00000306042 SOX5P35711 763 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 VEGFBP49765 207 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 RAD51Q06609 339 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 AMHR2Q16671 573 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 EARS2Q5JPH6 523 aaKnown RBP9.85□□□□□ -0.83
PTPRE-202ENST00000306042 ZNF720Q7Z2F6 126 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 CTAGE3PQ8IX95 158 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 PALM2Q8IXS6 379 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 DNAAF3Q8N9W5 541 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 MRPS31Q92665 395 aaKnown RBP9.85□□□□□ -0.83
PTPRE-202ENST00000306042 C18orf8Q96DM3 657 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 BPIFA3Q9BQP9 254 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 MTMR12Q9C0I1 747 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 RNF186Q9NXI6 227 aa9.85□□□□□ -0.83
PTPRE-202ENST00000306042 BTAF1O14981 1849 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 F8W8V4 182 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 CRCPO75575 148 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 PSMD10O75832 226 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 HMBSP08397 361 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 RPL10AP62906 217 aaKnown RBP9.84□□□□□ -0.83
PTPRE-202ENST00000306042 MTHFD1LQ6UB35 978 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 CBWD2Q8IUF1 395 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 FIBCD1Q8N539 461 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 SPIRE2Q8WWL2 714 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 VPS37BQ9H9H4 285 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 CWC15Q9P013 229 aaKnown RBP9.84□□□□□ -0.83
PTPRE-202ENST00000306042 OPA1O60313 960 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 CXCL8P10145 99 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 BCAR1P56945 870 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 COG7P83436 770 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 GDAP1Q8TB36 358 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 SKA2Q8WVK7 121 aaPredicted RBP9.84□□□□□ -0.83
PTPRE-202ENST00000306042 CCT6BQ92526 530 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 TTC1Q99614 292 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 FNDC3AQ9Y2H6 1198 aaKnown RBP9.84□□□□□ -0.83
PTPRE-202ENST00000306042 P4HA2O15460 535 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 TLL1O43897 1013 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 MFAP3LO75121 409 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 NDUFA10O95299 355 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 ST8SIA6P61647 398 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 HSDL1Q3SXM5 330 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 ZNF784Q8NCA9 323 aaPredicted RBP9.84□□□□□ -0.83
PTPRE-202ENST00000306042 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.84□□□□□ -0.83
PTPRE-202ENST00000306042 KRT12Q99456 494 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 CBWD1Q9BRT8 395 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 ZNF112Q9UJU3 913 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 NAGPAQ9UK23 515 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 DAAM1Q9Y4D1 1078 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 PCDHA13Q9Y5I0 950 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 TACC3Q9Y6A5 838 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 MAD1L1Q9Y6D9 718 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 MAN1A1P33908 653 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 LBX1P52954 281 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 HTRA3P83110 453 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 ATP11AP98196 1134 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 NFE2Q16621 373 aaPredicted RBP9.84□□□□□ -0.83
PTPRE-202ENST00000306042 PGBD3Q8N328 593 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 SLC28A3Q9HAS3 691 aa9.84□□□□□ -0.83
PTPRE-202ENST00000306042 PCSK1NQ9UHG2 260 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms