RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 PPP2R3CQ969Q6 453 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 JAKMIP2Q96AA8 810 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 CDK5RAP3Q96JB5 506 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 SCLT1Q96NL6 688 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 PNKPQ96T60 521 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 EDEM3Q9BZQ6 932 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 ZSWIM4Q9H7M6 989 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 NHEJ1Q9H9Q4 299 aaPredicted RBP8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 ATP6V0A4Q9HBG4 840 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 ERVK-5Q9HDB9 667 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 GUCA1BQ9UMX6 200 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 L1RE1Q9UN81 338 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 SIK3Q9Y2K2 1263 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 KIAA1217Q5T5P2 1943 aa8.51□□□□□ -1.05
TM4SF1-201ENST00000305366 IGLV3-22A0A075B6J6 115 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 IGKV6D-21A0A0A0MT36 114 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 CCDC66A2RUB6 948 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 ZBTB42B2RXF5 422 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 CSDE1O75534 798 aaKnown RBP8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 LCA5LO95447 670 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 TDP2O95551 362 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 RPLP2P05387 115 aaKnown RBP8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 SP100P23497 879 aaPredicted RBP8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 MCM3P25205 808 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 OAS2P29728 719 aaKnown RBP8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 PBX3P40426 434 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 SLC26A2P50443 739 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 VAV2P52735 878 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 CRYBB1P53674 252 aaPredicted RBP8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 NLRP11P59045 1033 aaKnown RBP8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 ERVFC1P60507 584 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 GPS2Q13227 327 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 SMAD2Q15796 467 aaKnown RBP8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 EFCAB12Q6NXP0 572 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 SLC24A5Q71RS6 500 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 FAM228AQ86W67 206 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 RNF135Q8IUD6 432 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 CRIPAKQ8N1N5 446 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 SNX29Q8TEQ0 813 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 SH2D3AQ9BRG2 576 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 NDST4Q9H3R1 872 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 SLC39A2Q9NP94 309 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 AAASQ9NRG9 546 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 RGS18Q9NS28 235 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 TBC1D22BQ9NU19 505 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 CLEC1BQ9P126 229 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 TRIM10Q9UDY6 481 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 PRKAG3Q9UGI9 489 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 SAR1BQ9Y6B6 198 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 SQORQ9Y6N5 450 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 KDM3AQ9Y4C1 1321 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 NCOR1O75376 2440 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 TARSL2A2RTX5 802 aaKnown RBP8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 FGF18O76093 207 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 C22orf31O95567 290 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 KLK7P49862 253 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 KCNA1Q09470 495 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 MMRN1Q13201 1228 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 SMAD4Q13485 552 aaKnown RBP8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 COL19A1Q14993 1142 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 PLPP4Q5VZY2 271 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 MOXD1Q6UVY6 613 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 LRRC55Q6ZSA7 311 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 HFE2Q6ZVN8 426 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 NIPA1Q7RTP0 329 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 ZNF572Q7Z3I7 529 aaPredicted RBP8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 EFHBQ8N7U6 833 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 DDX12PQ92771 950 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 MBOAT7Q96N66 472 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 TSG101Q99816 390 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 NT5C3AQ9H0P0 336 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 PSD3Q9NYI0 1048 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 PCDHA10Q9Y5I2 948 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 MYH7BA7E2Y1 1941 aa8.5□□□□□ -1.05
TM4SF1-201ENST00000305366 COL4A4P53420 1690 aaPredicted RBP8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 C9IYK1 514 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 USO1O60763 962 aaKnown RBP8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 GPR32O75388 356 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 ATP1A1P05023 1023 aaKnown RBP8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 CYP3A4P08684 503 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 PRLRP16471 622 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 VSNL1P62760 191 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 ITIH3Q06033 890 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 KIF5AQ12840 1032 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 SPA17Q15506 151 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 ZCWPW2Q504Y3 356 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 ODR4Q5SWX8 454 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 MCTP2Q6DN12 878 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 NCAPH2Q6IBW4 605 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 ZNF746Q6NUN9 644 aaPredicted RBP8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 ABI1Q8IZP0 508 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 COLGALT1Q8NBJ5 622 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 NOA1Q8NC60 698 aaKnown RBP8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 NLRP7Q8WX94 980 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 HAS1Q92839 578 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 DNAJC19Q96DA6 116 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 CCDC42Q96M95 316 aa8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 PCMTD1Q96MG8 357 aaPredicted RBP8.49□□□□□ -1.05
TM4SF1-201ENST00000305366 CEP63Q96MT8 703 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms