RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CCDC137Q6PK04 289 aaKnown RBP10.91□□□□□ -0.66
CLIP1-201ENST00000302528 TMC4Q7Z404 712 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 VN1R5Q7Z5H4 357 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 C2orf40Q9H1Z8 148 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 FAM187AA6NFU0 413 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 F8W810 466 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 ARSEP51690 589 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 KCNQ4P56696 695 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 CYLC2Q14093 348 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-201ENST00000302528 SLC44A4Q53GD3 710 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 PADI6Q6TGC4 694 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 SFR1Q86XK3 245 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 PPP2R3CQ969Q6 453 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 DDX47Q9H0S4 455 aaKnown RBP10.91□□□□□ -0.66
CLIP1-201ENST00000302528 LRRIQ1Q96JM4 1722 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 XPO1O14980 1071 aaKnown RBP10.91□□□□□ -0.66
CLIP1-201ENST00000302528 ALDH1A2O94788 518 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 PRELPP51888 382 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 CSTF3Q12996 717 aaKnown RBP10.91□□□□□ -0.66
CLIP1-201ENST00000302528 ERAP2Q6P179 960 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 UNC13DQ70J99 1090 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.91□□□□□ -0.66
CLIP1-201ENST00000302528 ANKMY2Q8IV38 441 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 CCT7Q99832 543 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 EVPLLA8MZ36 301 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 CLASP2O75122 1294 aaKnown RBP10.91□□□□□ -0.66
CLIP1-201ENST00000302528 TSC22D2O75157 780 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 HSPA9P38646 679 aaKnown RBP10.91□□□□□ -0.66
CLIP1-201ENST00000302528 AASDHQ4L235 1098 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-201ENST00000302528 SPATA21Q7Z572 469 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 DGKHQ86XP1 1220 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 RIN3Q8TB24 985 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 CMTM5Q96DZ9 223 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 RNPEPQ9H4A4 650 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 IMPAD1Q9NX62 359 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 FBXO40Q9UH90 709 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 KCNA3P22001 575 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 GRIK1P39086 918 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 WLSQ5T9L3 541 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 KCTD17Q8N5Z5 321 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 TNIP2Q8NFZ5 429 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 CLMNQ96JQ2 1002 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 ATP6V1G3Q96LB4 118 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 WNT8AQ9H1J5 351 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 ADGRA2Q96PE1 1338 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 ESYT3A0FGR9 886 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 RPS7P62081 194 aaKnown RBP10.9□□□□□ -0.66
CLIP1-201ENST00000302528 PLOD1Q02809 727 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-201ENST00000302528 AP3B2Q13367 1082 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 MFSD4BQ5TF39 518 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 ARL6IP4Q66PJ3 421 aaKnown RBP10.9□□□□□ -0.66
CLIP1-201ENST00000302528 ZNF746Q6NUN9 644 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-201ENST00000302528 KLHL24Q6TFL4 600 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 C1orf54Q8WWF1 131 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 PIK3R5Q8WYR1 880 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 DYNLL2Q96FJ2 89 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 RMDN3Q96TC7 470 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 ZNF302Q9NR11 478 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 KLC4Q9NSK0 619 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 HDAC6Q9UBN7 1215 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 ANO9A1A5B4 782 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 FTLP02792 175 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-201ENST00000302528 TCN1P20061 433 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-201ENST00000302528 SERPINB3P29508 390 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 VAMP7P51809 220 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 EIF3EP60228 445 aaKnown RBP10.9□□□□□ -0.66
CLIP1-201ENST00000302528 USP10Q14694 798 aaKnown RBP10.9□□□□□ -0.66
CLIP1-201ENST00000302528 CCDC60Q8IWA6 550 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-201ENST00000302528 PTPRN2Q92932 1015 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 AGAP3Q96P47 875 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 MYO5CQ9NQX4 1742 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 YEATS2Q9ULM3 1422 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 STAT3P40763 770 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 UGP2Q16851 508 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 POTEAQ6S8J7 498 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 C2orf69Q8N8R5 385 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 MAP4K1Q92918 833 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 ZNF560Q96MR9 790 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 RBBP8Q99708 897 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 TRABDQ9H4I3 376 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 TAF1DQ9H5J8 278 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-201ENST00000302528 KRCC1Q9NPI7 259 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-201ENST00000302528 KRT84Q9NSB2 600 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 SPASTQ9UBP0 616 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 PNMA8BQ9ULN7 279 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-201ENST00000302528 KIF24Q5T7B8 1368 aa10.9□□□□□ -0.66
CLIP1-201ENST00000302528 GRID2IPA4D2P6 1211 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 TEX28O15482 410 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 PSMD3O43242 534 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 NDUFB5O43674 189 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 CAPN1P07384 714 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 USP17L8P0C7I0 530 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 ALOX15P16050 662 aaPredicted RBP10.9□□□□□ -0.67
CLIP1-201ENST00000302528 SULT1E1P49888 294 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 KCNK10P57789 538 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 STX3Q13277 289 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 SGO1Q5FBB7 561 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 LONP2Q86WA8 852 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 SPATA2LQ8IUW3 424 aaPredicted RBP10.9□□□□□ -0.67
CLIP1-201ENST00000302528 JADE3Q92613 823 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms