RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 NPTX2P47972 431 aa14.35□□□□□ -0.11
CTDP1-202ENST00000299543 SYTL5Q8TDW5 730 aaPredicted RBP14.35□□□□□ -0.11
CTDP1-202ENST00000299543 LY75O60449 1722 aa14.35□□□□□ -0.11
CTDP1-202ENST00000299543 ATRNL1Q5VV63 1379 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 PASKQ96RG2 1323 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 FOCADQ5VW36 1801 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 GSTTP1A0A1W2PQM5 241 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 PODXLO00592 558 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 ASNSP08243 561 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 PTGIRP43119 386 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 PLCB4Q15147 1175 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 ERICH1Q86X53 443 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 KCTD17Q8N5Z5 321 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 AKT1S1Q96B36 256 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 MRRFQ96E11 262 aaKnown RBP14.34□□□□□ -0.11
CTDP1-202ENST00000299543 WNT8AQ9H1J5 351 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 RAB20Q9NX57 234 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.34□□□□□ -0.112e-6■■■■□ 21.7
CTDP1-202ENST00000299543 GABBR1Q9UBS5 961 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 TBX20Q9UMR3 447 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 ASTN2O75129 1339 aaPredicted RBP14.34□□□□□ -0.11
CTDP1-202ENST00000299543 RPTORQ8N122 1335 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 PEX5P50542 639 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 FKBP1AP62942 108 aaKnown RBP14.34□□□□□ -0.11
CTDP1-202ENST00000299543 KRT17Q04695 432 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 SV2AQ7L0J3 742 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 PRUNE1Q86TP1 453 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 FAM71AQ8IYT1 594 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 LRRC34Q8IZ02 419 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 CCDC63Q8NA47 563 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 C1orf131Q8NDD1 294 aaKnown RBP14.34□□□□□ -0.11
CTDP1-202ENST00000299543 FBXL13Q8NEE6 735 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 SEC14L1Q92503 715 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 KIFAP3Q92845 792 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 MTFR1LQ9H019 292 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 EPB41L4BQ9H329 900 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 LMCD1Q9NZU5 365 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 PDHA1P08559 390 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 ADCY8P40145 1251 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 SLC8A3P57103 927 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 HP1BP3Q5SSJ5 553 aaPredicted RBP14.34□□□□□ -0.11
CTDP1-202ENST00000299543 SPOPLQ6IQ16 392 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 STYK1Q6J9G0 422 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 NLRX1Q86UT6 975 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 CHST7Q9NS84 486 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 KLHL11Q9NVR0 708 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 NOCTQ9UK39 431 aaKnown RBP14.34□□□□□ -0.11
CTDP1-202ENST00000299543 AGAP1Q9UPQ3 857 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 EXOC7Q9UPT5 735 aa14.34□□□□□ -0.11
CTDP1-202ENST00000299543 PFASO15067 1338 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 PYGBP11216 843 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 RFX1P22670 979 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 PSMC5P62195 406 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 XRCC4Q13426 336 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 EMC10Q5UCC4 262 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 C11orf63Q6NUN7 778 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 SWSAP1Q6NVH7 229 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 CAPN12Q6ZSI9 719 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 GDAP1Q8TB36 358 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 PAIP2Q9BPZ3 127 aaKnown RBP14.33□□□□□ -0.11
CTDP1-202ENST00000299543 LBHD1Q9BQE6 289 aaPredicted RBP14.33□□□□□ -0.11
CTDP1-202ENST00000299543 STRA6Q9BX79 667 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 ACTR5Q9H9F9 607 aaPredicted RBP14.33□□□□□ -0.11
CTDP1-202ENST00000299543 TMEM165Q9HC07 324 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 FZD1Q9UP38 647 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 TELO2Q9Y4R8 837 aa14.33□□□□□ -0.11
CTDP1-202ENST00000299543 CCNE2O96020 404 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 CREB1P16220 341 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 ACOT2P49753 483 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 KYNUQ16719 465 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 KAZNQ674X7 775 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 TRIM74Q86UV6 250 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 TRIM73Q86UV7 250 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 MCF2L2Q86YR7 1114 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 ADAM33Q9BZ11 813 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 CNOT10Q9H9A5 744 aaKnown RBP14.33□□□□□ -0.12
CTDP1-202ENST00000299543 SAMD15Q9P1V8 674 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 CTNNAL1Q9UBT7 734 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 ZNF536O15090 1300 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 GJB6O95452 261 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 RRM1P23921 792 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 GTF2BQ00403 316 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 BAATQ14032 418 aaPredicted RBP14.33□□□□□ -0.12
CTDP1-202ENST00000299543 C6orf118Q5T5N4 469 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 B3GNT9Q6UX72 402 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 GSTA5Q7RTV2 222 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 CCDC197Q8NCU1 140 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 CLEC4DQ8WXI8 215 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 BSNDQ8WZ55 320 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 FNBP1Q96RU3 617 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 PAGR1Q9BTK6 254 aa14.33□□□□□ -0.12
CTDP1-202ENST00000299543 SEPT9Q9UHD8 586 aaPredicted RBP14.33□□□□□ -0.12
CTDP1-202ENST00000299543 C10orf71Q711Q0 1435 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 RIPK2O43353 540 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 HSPA6P17066 643 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 DRD4P21917 467 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 CDR2Q01850 454 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 PRAMEF18Q5VWM3 479 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 SEPT14Q6ZU15 432 aa14.32□□□□□ -0.12
CTDP1-202ENST00000299543 ANKS4BQ8N8V4 417 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms