RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 PCDHGC5Q9Y5F6 944 aa15.35■□□□□ 0.05
C9orf3-202ENST00000297979 KIF3CO14782 793 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 CTGFP29279 349 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 IFI16Q16666 785 aaKnown RBP15.34■□□□□ 0.05
C9orf3-202ENST00000297979 AMHR2Q16671 573 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 DNAAF5Q86Y56 855 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 THNSL1Q8IYQ7 743 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 KIAA0319LQ8IZA0 1049 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 LMBR1Q8WVP7 490 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 GOLGA1Q92805 767 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 KAT2BQ92831 832 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 SCLT1Q96NL6 688 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 AP5M1Q9H0R1 490 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 NOCTQ9UK39 431 aaKnown RBP15.34■□□□□ 0.05
C9orf3-202ENST00000297979 SNX12Q9UMY4 172 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 A0A0A6YYK5 440 aaPredicted RBP15.34■□□□□ 0.05
C9orf3-202ENST00000297979 PHACTR2O75167 634 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 PALMO75781 387 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 SGPL1O95470 568 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
C9orf3-202ENST00000297979 SMIM10L2AP0DMW4 78 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 SMIM10L2BP0DMW5 78 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 NFRKBQ6P4R8 1299 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 RSRC2Q7L4I2 434 aaKnown RBP15.34■□□□□ 0.05
C9orf3-202ENST00000297979 RPUSD2Q8IZ73 545 aaKnown RBP15.34■□□□□ 0.05
C9orf3-202ENST00000297979 NRCAMQ92823 1304 aa15.34■□□□□ 0.05
C9orf3-202ENST00000297979 CSDE1O75534 798 aaKnown RBP15.33■□□□□ 0.04
C9orf3-202ENST00000297979 GALCP54803 685 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 MFSD10Q14728 455 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 NOP9Q86U38 636 aaKnown RBP15.33■□□□□ 0.04
C9orf3-202ENST00000297979 ZNF410Q86VK4 478 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 CDR2LQ86X02 465 aaPredicted RBP15.33■□□□□ 0.04
C9orf3-202ENST00000297979 DHX38Q92620 1227 aaKnown RBP15.33■□□□□ 0.04
C9orf3-202ENST00000297979 FAM212AQ96EL1 285 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 TMCO5BA8MYB1 307 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 SRGAP2O75044 1071 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 TMEM253P0C7T8 217 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 PDE6CP51160 858 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 FCGRTP55899 365 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 NCOA4Q13772 614 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 TEX35Q5T0J7 233 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 SLC47A2Q86VL8 602 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 PALB2Q86YC2 1186 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 TSKSQ9UJT2 592 aa15.33■□□□□ 0.04
C9orf3-202ENST00000297979 CTAGE15A4D2H0 777 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 GRID2IPA4D2P6 1211 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 CTAGE8P0CG41 777 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 MCF2P10911 925 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 KRT5P13647 590 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 CYP11B1P15538 503 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 PRLRP16471 622 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 CTAGE6Q86UF2 777 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 CTAGE4Q8IX94 777 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 PDZD7Q9H5P4 517 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 HYOU1Q9Y4L1 999 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 NCANO14594 1321 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 ALDH1A1P00352 501 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 NOP2P46087 812 aaKnown RBP15.32■□□□□ 0.04
C9orf3-202ENST00000297979 OSTNP61366 133 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 NOP14P78316 857 aaKnown RBP15.32■□□□□ 0.04
C9orf3-202ENST00000297979 IRX5P78411 483 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-202ENST00000297979 CKAP4Q07065 602 aaKnown RBP15.32■□□□□ 0.04
C9orf3-202ENST00000297979 SPOPLQ6IQ16 392 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 CYP4F22Q6NT55 531 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 CTNNBL1Q8WYA6 563 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-202ENST00000297979 IMPG2Q9BZV3 1241 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 MTMR12Q9C0I1 747 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 APOBEC3GQ9HC16 384 aaKnown RBP15.32■□□□□ 0.04
C9orf3-202ENST00000297979 TAS2R14Q9NYV8 317 aa15.32■□□□□ 0.04
C9orf3-202ENST00000297979 ANK1P16157 1881 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 GPR25O00155 361 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 MYL3P08590 195 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 AKR1A1P14550 325 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 CHRNB2P17787 502 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 TCP1P17987 556 aaKnown RBP15.31■□□□□ 0.04
C9orf3-202ENST00000297979 ARF4P18085 180 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-202ENST00000297979 PSMC4P43686 418 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 PSEN2P49810 448 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 DUOXA2Q1HG44 320 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 TLR10Q9BXR5 811 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 RPF1Q9H9Y2 349 aaKnown RBP15.31■□□□□ 0.04
C9orf3-202ENST00000297979 MBLAC1A4D2B0 266 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-202ENST00000297979 HAS3O00219 553 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 B4GALT4O60513 344 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 ERLIN2O94905 339 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 IL18RAPO95256 599 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 CLTAP09496 248 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 TBXAS1P24557 533 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-202ENST00000297979 CUL2Q13617 745 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 RFFLQ8WZ73 363 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 RABGGTAQ92696 567 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 CPB2Q96IY4 423 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 CAPZA3Q96KX2 299 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 ARHGAP39Q9C0H5 1083 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 FAM49AQ9H0Q0 323 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-202ENST00000297979 ACP6Q9NPH0 428 aa15.31■□□□□ 0.04
C9orf3-202ENST00000297979 ANKRD62A6NC57 917 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 NCK2O43639 380 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 TSPAN1O60635 241 aa15.3■□□□□ 0.04
C9orf3-202ENST00000297979 FTCDO95954 541 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms