RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 MYH11P35749 1972 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 RTN3O95197 1032 aaPredicted RBP16.64■□□□□ 0.25
UBAP1-201ENST00000297661 SGPL1O95470 568 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 SLCO1A2P46721 670 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 NPEPPSP55786 919 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 CNGA2Q16280 664 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 RANBP17Q9H2T7 1088 aaKnown RBP16.64■□□□□ 0.25
UBAP1-201ENST00000297661 KCNH7Q9NS40 1196 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 PSME4Q14997 1843 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 TCRBV7S2A1N4TA0A589 114 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 ANXA13P27216 316 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 ROR2Q01974 943 aaKnown RBP16.64■□□□□ 0.25
UBAP1-201ENST00000297661 SLC5A9Q2M3M2 681 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 C6orf118Q5T5N4 469 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 FITM2Q8N6M3 262 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 DYDC1Q8WWB3 177 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 CCDC127Q96BQ5 260 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 ANKRD27Q96NW4 1050 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 PCDHB18PQ96TA0 734 aa16.64■□□□□ 0.25
UBAP1-201ENST00000297661 POP1Q99575 1024 aaKnown RBP16.64■□□□□ 0.25
UBAP1-201ENST00000297661 LRRD1A4D1F6 860 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 TCP11X1B4DZS4 312 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 SLC16A4O15374 487 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 VAMP7P51809 220 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 MXRA7P84157 204 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 SPP2Q13103 211 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 LRRC14Q15048 493 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 CCDC38Q502W7 563 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 STXBP4Q6ZWJ1 553 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 ZDHHC14Q8IZN3 488 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 EPS8L3Q8TE67 593 aaKnown RBP16.63■□□□□ 0.25
UBAP1-201ENST00000297661 TMOD2Q9NZR1 351 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 FZD1Q9UP38 647 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 MRPL11Q9Y3B7 192 aaKnown RBP16.63■□□□□ 0.25
UBAP1-201ENST00000297661 ZHX2Q9Y6X8 837 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 ANKRD62A6NC57 917 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 SPDYE5A6NIY4 337 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 HGSO14964 777 aaPredicted RBP16.63■□□□□ 0.25
UBAP1-201ENST00000297661 PTENP60484 403 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 PDCD2Q16342 344 aaPredicted RBP16.63■□□□□ 0.25
UBAP1-201ENST00000297661 C1orf220Q5T0J3 134 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 MAP1SQ66K74 1059 aaPredicted RBP16.63■□□□□ 0.25
UBAP1-201ENST00000297661 DUPD1Q68J44 220 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 NSMFQ6X4W1 530 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 ZNF784Q8NCA9 323 aaPredicted RBP16.63■□□□□ 0.25
UBAP1-201ENST00000297661 ERP44Q9BS26 406 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 SEL1LQ9UBV2 794 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 NKX1-2Q9UD57 310 aaPredicted RBP16.63■□□□□ 0.25
UBAP1-201ENST00000297661 CCPG1Q9ULG6 757 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 PTPN22Q9Y2R2 807 aa16.63■□□□□ 0.25
UBAP1-201ENST00000297661 CYP26A1O43174 497 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 MAP3K13O43283 966 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 TUBP50607 506 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 KIF22Q14807 665 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 UGCGQ16739 394 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 ANGEL2Q5VTE6 544 aaKnown RBP16.62■□□□□ 0.25
UBAP1-201ENST00000297661 PLA2G4FQ68DD2 849 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 PHLDB2Q86SQ0 1253 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 SLC47A2Q86VL8 602 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 PPM1KQ8N3J5 372 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 FBXO25Q8TCJ0 367 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 MGARPQ8TDB4 240 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 CHURC1Q8WUH1 139 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 ITFG2Q969R8 447 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 MXRA8Q9BRK3 442 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 ZNF70Q9UC06 446 aaPredicted RBP16.62■□□□□ 0.25
UBAP1-201ENST00000297661 DAAM1Q9Y4D1 1078 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 SPDYE2BA6NHP3 402 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 PCK1P35558 622 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 PEX3P56589 373 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 SOX10P56693 466 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 NUGGCQ68CJ6 796 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 JAMLQ86YT9 394 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 TEKT4Q8WW24 435 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 SEMA4AQ9H3S1 761 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 PIDD1Q9HB75 910 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 RXFP1Q9HBX9 757 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 GGA3Q9NZ52 723 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 HSPBP1Q9NZL4 362 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 ZMYND8Q9ULU4 1186 aaPredicted RBP16.62■□□□□ 0.25
UBAP1-201ENST00000297661 LRRC42Q9Y546 428 aa16.62■□□□□ 0.25
UBAP1-201ENST00000297661 NPM3O75607 178 aaKnown RBP16.61■□□□□ 0.25
UBAP1-201ENST00000297661 PDHA1P08559 390 aa16.61■□□□□ 0.25
UBAP1-201ENST00000297661 VCAM1P19320 739 aa16.61■□□□□ 0.25
UBAP1-201ENST00000297661 EIF2AK2P19525 551 aaKnown RBP16.61■□□□□ 0.25
UBAP1-201ENST00000297661 COMTP21964 271 aa16.61■□□□□ 0.25
UBAP1-201ENST00000297661 RPS12P25398 132 aaKnown RBP16.61■□□□□ 0.25
UBAP1-201ENST00000297661 NFIL3Q16649 462 aa16.61■□□□□ 0.25
UBAP1-201ENST00000297661 TTC27Q6P3X3 843 aa16.61■□□□□ 0.25
UBAP1-201ENST00000297661 NOP9Q86U38 636 aaKnown RBP16.61■□□□□ 0.25
UBAP1-201ENST00000297661 SLC17A8Q8NDX2 589 aa16.61■□□□□ 0.25
UBAP1-201ENST00000297661 STRA6Q9BX79 667 aa16.61■□□□□ 0.25
UBAP1-201ENST00000297661 TOPORSQ9NS56 1045 aaPredicted RBP16.61■□□□□ 0.25
UBAP1-201ENST00000297661 HERC5Q9UII4 1024 aaKnown RBP16.61■□□□□ 0.25
UBAP1-201ENST00000297661 DBR1Q9UK59 544 aaKnown RBP16.61■□□□□ 0.25
UBAP1-201ENST00000297661 WFS1O76024 890 aa16.61■□□□□ 0.25
UBAP1-201ENST00000297661 ADRB2P07550 413 aa16.61■□□□□ 0.25
UBAP1-201ENST00000297661 BCRP11274 1271 aa16.61■□□□□ 0.25
UBAP1-201ENST00000297661 GNAZP19086 355 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms