RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 CARTPTQ16568 116 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 NIPAL1Q6NVV3 410 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 DUS1LQ6P1R4 473 aaKnown RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 TTC27Q6P3X3 843 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 CNNM4Q6P4Q7 775 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 PLEKHM3Q6ZWE6 761 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 ARPINQ7Z6K5 226 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 LSM14BQ9BX40 385 aaKnown RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 COG4Q9H9E3 785 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 RIC8AQ9NPQ8 531 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 ASB3Q9Y575 518 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 NOS1APO75052 506 aaPredicted RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 ZC3H11AO75152 810 aaKnown RBP eCLIP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 MYO1DO94832 1006 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 BMP10O95393 424 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 ANPEPP15144 967 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 ALDH1B1P30837 517 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 MAPK6Q16659 721 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 CGREF1Q99674 301 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 EMILIN2Q9BXX0 1053 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 ARMC7Q9H6L4 198 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 SLC35C2Q9NQQ7 365 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 ARHGEF3Q9NR81 526 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 SCAF8Q9UPN6 1271 aaKnown RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 TMEM5Q9Y2B1 443 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 MYRFQ9Y2G1 1151 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 NOC2LQ9Y3T9 749 aaKnown RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 MAGEB16A2A368 324 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 SH3D21A4FU49 640 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 FAM187AA6NFU0 413 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 TNFRSF10AO00220 468 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 APOA4P06727 396 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 PLS3P13797 630 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 UQCRBP14927 111 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 THOP1P52888 689 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 BFSP1Q12934 665 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 RTN1Q16799 776 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 ANO4Q32M45 955 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 POTEAQ6S8J7 498 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 GIMAP8Q8ND71 665 aaPredicted RBP12.35□□□□□ -0.43
SNIP1-201ENST00000296215 SH3TC2Q8TF17 1288 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 ZNF274Q96GC6 653 aaPredicted RBP12.35□□□□□ -0.43
SNIP1-201ENST00000296215 CNOT6LQ96LI5 555 aaKnown RBP12.35□□□□□ -0.43
SNIP1-201ENST00000296215 TEX13BQ9BXU2 312 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 RGS20O76081 388 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 PRLRP16471 622 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 PLCG1P19174 1290 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 BARGINQ6ZT62 677 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
SNIP1-201ENST00000296215 PLEKHO2Q8TD55 490 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 SH3KBP1Q96B97 665 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 PGBD4Q96DM1 585 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 SIPA1Q96FS4 1042 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 GLT8D2Q9H1C3 349 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 TMEM206Q9H813 350 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 ADD3Q9UEY8 706 aaKnown RBP12.35□□□□□ -0.43
SNIP1-201ENST00000296215 ZNF652Q9Y2D9 606 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 ABCC4O15439 1325 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 POTECB2RU33 542 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 ATP9BO43861 1147 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 PDGFRBP09619 1106 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 KITP10721 976 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 RPS6P62753 249 aaKnown RBP12.35□□□□□ -0.43
SNIP1-201ENST00000296215 ERVK-24P63145 666 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 TTC23LQ6PF05 361 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 PALB2Q86YC2 1186 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 OR7G1Q8NGA0 311 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 SEZ6LQ9BYH1 1024 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 PCSK1NQ9UHG2 260 aa12.35□□□□□ -0.43
SNIP1-201ENST00000296215 CDH16O75309 829 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 CHRNB1P11230 501 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 TCEA1P23193 301 aaKnown RBP12.34□□□□□ -0.43
SNIP1-201ENST00000296215 ALDH18A1P54886 795 aaKnown RBP12.34□□□□□ -0.43
SNIP1-201ENST00000296215 ZFP69Q49AA0 526 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 EFHC1Q5JVL4 640 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 SHCBP1LQ9BZQ2 653 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 NKX1-2Q9UD57 310 aaPredicted RBP12.34□□□□□ -0.43
SNIP1-201ENST00000296215 IQANK1A0A1B0GTG1 560 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 SH3PXD2BA1X283 911 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 LGALS16A8MUM7 142 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 IFIT1P09914 478 aaKnown RBP12.34□□□□□ -0.43
SNIP1-201ENST00000296215 CCT8P50990 548 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 CCDC149Q6ZUS6 474 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 ENGASEQ8NFI3 743 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 ZNF507Q8TCN5 953 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 JADE3Q92613 823 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 NACC2Q96BF6 587 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 PSKH2Q96QS6 385 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 DENND2DQ9H6A0 471 aaPredicted RBP12.34□□□□□ -0.43
SNIP1-201ENST00000296215 CENPBD1B2RD01 187 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 SULT1C3Q6IMI6 304 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 NDUFAF2Q8N183 169 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 ANKRD49Q8WVL7 239 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 SAR1AQ9NR31 198 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 SOX13Q9UN79 622 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 SMG5Q9UPR3 1016 aaKnown RBP12.34□□□□□ -0.43
SNIP1-201ENST00000296215 ARHGAP31Q2M1Z3 1444 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 A0A087WXM4 84 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 EXOC3O60645 756 aa12.34□□□□□ -0.43
SNIP1-201ENST00000296215 INHBAP08476 426 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms