RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 CYP1B1Q16678 543 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 MAP1SQ66K74 1059 aaPredicted RBP16.14■□□□□ 0.17
CCDC116-201ENST00000292779 ZNF516Q92618 1163 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 CLMNQ96JQ2 1002 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 C12orf42Q96LP6 360 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 POLR3FQ9H1D9 316 aaPredicted RBP16.14■□□□□ 0.17
CCDC116-201ENST00000292779 ATP6V0A4Q9HBG4 840 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 SLC9A2Q9UBY0 812 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 MTUS1Q9ULD2 1270 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 PTPN22Q9Y2R2 807 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 CAND2O75155 1236 aa16.13■□□□□ 0.17
CCDC116-201ENST00000292779 NUDT17P0C025 328 aa16.13■□□□□ 0.17
CCDC116-201ENST00000292779 ACTR2P61160 394 aa16.13■□□□□ 0.17
CCDC116-201ENST00000292779 GCNT1Q02742 428 aa16.13■□□□□ 0.17
CCDC116-201ENST00000292779 LMBRD2Q68DH5 695 aaPredicted RBP16.13■□□□□ 0.17
CCDC116-201ENST00000292779 CCDC105Q8IYK2 499 aa16.13■□□□□ 0.17
CCDC116-201ENST00000292779 RNF25Q96BH1 459 aaPredicted RBP16.13■□□□□ 0.17
CCDC116-201ENST00000292779 IFT74Q96LB3 600 aa16.13■□□□□ 0.17
CCDC116-201ENST00000292779 TEX13BQ9BXU2 312 aa16.13■□□□□ 0.17
CCDC116-201ENST00000292779 ARHGAP28Q9P2N2 729 aa16.13■□□□□ 0.17
CCDC116-201ENST00000292779 KCNJ1P48048 391 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 LIG3P49916 1009 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 RTP1P59025 263 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 VGLL4Q14135 290 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 LLGL1Q15334 1064 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 DENND2CQ68D51 928 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 C15orf39Q6ZRI6 1047 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 PSPC1Q8WXF1 523 aaKnown RBP16.12■□□□□ 0.17
CCDC116-201ENST00000292779 TLCD1Q96CP7 247 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 ACAD9Q9H845 621 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 RRAGCQ9HB90 399 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 C1orf112Q9NSG2 853 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 PPP2R3BQ9Y5P8 575 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 SNCAIPQ9Y6H5 919 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 NFASCO94856 1347 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 C19orf81C9J6K1 198 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 MTERF2Q49AM1 385 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 ABHD15Q6UXT9 468 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 CATSPERGQ6ZRH7 1159 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 ENOSF1Q7L5Y1 443 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 PACS2Q86VP3 889 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 ZNF526Q8TF50 670 aaPredicted RBP16.12■□□□□ 0.17
CCDC116-201ENST00000292779 PAGR1Q9BTK6 254 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 PARP2Q9UGN5 583 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 ANAPC7Q9UJX3 599 aa16.12■□□□□ 0.17
CCDC116-201ENST00000292779 GMNCA6NCL1 334 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 CLDN3O15551 220 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 TRAPPC3O43617 180 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 ZC3H11AO75152 810 aaKnown RBP eCLIP16.11■□□□□ 0.17
CCDC116-201ENST00000292779 UNGP13051 313 aaPredicted RBP16.11■□□□□ 0.17
CCDC116-201ENST00000292779 MAPK4P31152 587 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 GBP1P32455 592 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 LIG4P49917 911 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 SP2Q02086 613 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 SLC29A2Q14542 456 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 SUPT20HL1Q3ZLR7 823 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 UBAP2Q5T6F2 1119 aaKnown RBP16.11■□□□□ 0.17
CCDC116-201ENST00000292779 HOOK3Q86VS8 718 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 SPATS2Q86XZ4 545 aaKnown RBP16.11■□□□□ 0.17
CCDC116-201ENST00000292779 MICALL1Q8N3F8 863 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 CDHR1Q96JP9 859 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 TRIM7Q9C029 511 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 SEMA4AQ9H3S1 761 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 MTRF1LQ9UGC7 380 aaKnown RBP16.11■□□□□ 0.17
CCDC116-201ENST00000292779 ATXN2Q99700 1313 aaKnown RBP16.11■□□□□ 0.17
CCDC116-201ENST00000292779 SPATA31C2B4DYI2 1134 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 ATP2A1O14983 1001 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 EXTL3O43909 919 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 WNT7BP56706 349 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 ENPEPQ07075 957 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 TTC31Q49AM3 519 aaPredicted RBP16.11■□□□□ 0.17
CCDC116-201ENST00000292779 CYFIP1Q7L576 1253 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 PHLDB2Q86SQ0 1253 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 MCOLN2Q8IZK6 566 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 C12orf50Q8NA57 414 aaPredicted RBP16.11■□□□□ 0.17
CCDC116-201ENST00000292779 CPA5Q8WXQ8 436 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 LCTP09848 1927 aa16.11■□□□□ 0.17
CCDC116-201ENST00000292779 SPDYE16A6NNV3 312 aaPredicted RBP16.1■□□□□ 0.17
CCDC116-201ENST00000292779 TNNI1P19237 187 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 SCP2P22307 547 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 FNTAP49354 379 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 NLRP11P59045 1033 aaKnown RBP16.1■□□□□ 0.17
CCDC116-201ENST00000292779 GNPTABQ3T906 1256 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 MIS18BP1Q6P0N0 1132 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 RAPGEF5Q92565 580 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 CYFIP2Q96F07 1278 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 RUNDC3BQ96NL0 473 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 NMRK2Q9NPI5 230 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 MROH7Q68CQ1 1323 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 MYPNQ86TC9 1320 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 PASKQ96RG2 1323 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 FSCN2O14926 492 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 MEFVO15553 781 aaPredicted RBP16.1■□□□□ 0.17
CCDC116-201ENST00000292779 KIAA0754O94854 1291 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 CPP00450 1065 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 HLA-DRAP01903 254 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 ACOT2P49753 483 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 CLDN10P78369 228 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 EMC2Q15006 297 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 PSMD6Q15008 389 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms