RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 ACO2Q99798 780 aaKnown RBP9.71□□□□□ -0.86
TFF1-201ENST00000291527 KXD1Q9BQD3 176 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 ANP32EQ9BTT0 268 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 TARS2Q9BW92 718 aaKnown RBP9.71□□□□□ -0.86
TFF1-201ENST00000291527 RHOBTB2Q9BYZ6 727 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 CDT1Q9H211 546 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 PLEKHA4Q9H4M7 779 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 PTPRHQ9HD43 1115 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 DDX19AQ9NUU7 478 aaKnown RBP9.71□□□□□ -0.86
TFF1-201ENST00000291527 ZDHHC7Q9NXF8 308 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 IGSF9Q9P2J2 1179 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 WNT16Q9UBV4 365 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 POLIQ9UNA4 740 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 LIMCH1Q9UPQ0 1083 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 TICRRQ7Z2Z1 1910 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 NCANO14594 1321 aa9.71□□□□□ -0.86
TFF1-201ENST00000291527 SF3B1O75533 1304 aaKnown RBP eCLIP9.71□□□□□ -0.86
TFF1-201ENST00000291527 COL4A2P08572 1712 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 SCN1AP35498 2009 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 SMIM28A0A1B0GU29 152 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 CARNS1A5YM72 827 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 HIP1RO75146 1068 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 CD2BP2O95400 341 aaKnown RBP9.7□□□□□ -0.86
TFF1-201ENST00000291527 HOXC13P31276 330 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 CCR2P41597 374 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 NPTX2P47972 431 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 CACNB1Q02641 598 aaPredicted RBP9.7□□□□□ -0.86
TFF1-201ENST00000291527 SPAG1Q07617 926 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 RAD51AP2Q09MP3 1159 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 PTGDRQ13258 359 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 MAPK6Q16659 721 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 UPP1Q16831 310 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 TMEM132AQ24JP5 1023 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 ATF7IP2Q5U623 682 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 ZBTB8OSQ8IWT0 167 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 DCLK2Q8N568 766 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 HDAC7Q8WUI4 952 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 PRIMPOLQ96LW4 560 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 PNMA5Q96PV4 448 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 FOXP1Q9H334 677 aaPredicted RBP9.7□□□□□ -0.86
TFF1-201ENST00000291527 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.7□□□□□ -0.86
TFF1-201ENST00000291527 SSX2IPQ9Y2D8 614 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 CDY1Q9Y6F8 540 aa9.7□□□□□ -0.86
TFF1-201ENST00000291527 LAMA1P25391 3075 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 SLC16A4O15374 487 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 TBC1D4O60343 1298 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 NR1I2O75469 434 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 B3GAT3O94766 335 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 VNN2O95498 520 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 HARSP12081 509 aaKnown RBP9.69□□□□□ -0.86
TFF1-201ENST00000291527 CEBPBP17676 345 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 FXR2P51116 673 aaKnown RBP eCLIP9.69□□□□□ -0.86
TFF1-201ENST00000291527 GUCY2FP51841 1108 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 NUBP1P53384 320 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 RAB33AQ14088 237 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 C8orf34Q49A92 452 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 XKR4Q5GH76 650 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 PPM1LQ5SGD2 360 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 ZBTB41Q5SVQ8 909 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 TANGO2Q6ICL3 276 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 RINT1Q6NUQ1 792 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 DCLRE1AQ6PJP8 1040 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 C1orf186Q6ZWK4 172 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 SDK1Q7Z5N4 2213 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 GPIHBP1Q8IV16 184 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 NPAS3Q8IXF0 933 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 HS6ST3Q8IZP7 471 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 IGSF22Q8N9C0 903 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 SNX29Q8TEQ0 813 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 MCRS1Q96EZ8 462 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 SNX27Q96L92 541 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 ZSWIM3Q96MP5 696 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 C2orf40Q9H1Z8 148 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 IKZF4Q9H2S9 585 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 MTRRQ9UBK8 725 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 STK39Q9UEW8 545 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 LRWD1Q9UFC0 647 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 CDH7Q9ULB5 785 aa9.69□□□□□ -0.86
TFF1-201ENST00000291527 NCOR2Q9Y618 2525 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 ZMYM2Q9UBW7 1377 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 WDR27A2RRH5 827 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 CCDC169A6NNP5 214 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 K7ERI5 159 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 MOSPD3O75425 235 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 SP9P0CG40 484 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 GJA1P17302 382 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 PROZP22891 400 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 FCARP24071 287 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 U2AF2P26368 475 aaKnown RBP eCLIP9.68□□□□□ -0.86
TFF1-201ENST00000291527 ARPP19P56211 112 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 FZD5Q13467 585 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 ARSHQ5FYA8 562 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 SCARA3Q6AZY7 606 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 CYP26C1Q6V0L0 522 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.68□□□□□ -0.86
TFF1-201ENST00000291527 GPR65Q8IYL9 337 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 HACE1Q8IYU2 909 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 STAMQ92783 540 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 NKD2Q969F2 451 aaPredicted RBP9.68□□□□□ -0.86
TFF1-201ENST00000291527 RTP3Q9BQQ7 232 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms