RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 LRCH3Q96II8 777 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 KCNF1Q9H3M0 494 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 RPF1Q9H9Y2 349 aaKnown RBP16.7■□□□□ 0.26
NCK1-201ENST00000288986 TBC1D13Q9NVG8 400 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 MIOSQ9NXC5 875 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 HSPBP1Q9NZL4 362 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 CGNQ9P2M7 1197 aaKnown RBP16.7■□□□□ 0.26
NCK1-201ENST00000288986 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.7■□□□□ 0.26
NCK1-201ENST00000288986 CALUO43852 315 aaPredicted RBP16.7■□□□□ 0.26
NCK1-201ENST00000288986 CYP2J2P51589 502 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 COPB1P53618 953 aaKnown RBP16.7■□□□□ 0.26
NCK1-201ENST00000288986 EDRF1Q3B7T1 1238 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 FAM114A1Q8IWE2 563 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 GPD1LQ8N335 351 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 RDH13Q8NBN7 331 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 GSTCDQ8NEC7 633 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 ANKRD20A12PQ8NF67 263 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 FAM193BQ96PV7 902 aaPredicted RBP16.7■□□□□ 0.26
NCK1-201ENST00000288986 TSG101Q99816 390 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 CXCL16Q9H2A7 254 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 HCSTQ9UBK5 93 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 CPSF3Q9UKF6 684 aaKnown RBP16.7■□□□□ 0.26
NCK1-201ENST00000288986 MTUS1Q9ULD2 1270 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 TRAF3IP3Q9Y228 551 aa16.7■□□□□ 0.26
NCK1-201ENST00000288986 MRPL42Q9Y6G3 142 aaKnown RBP16.7■□□□□ 0.26
NCK1-201ENST00000288986 ESPNB1AK53 854 aa16.69■□□□□ 0.26
NCK1-201ENST00000288986 KIAA0391O15091 583 aaKnown RBP16.69■□□□□ 0.26
NCK1-201ENST00000288986 EXTL3O43909 919 aa16.69■□□□□ 0.26
NCK1-201ENST00000288986 ARHGEF15O94989 841 aa16.69■□□□□ 0.26
NCK1-201ENST00000288986 GSDMDP57764 484 aa16.69■□□□□ 0.26
NCK1-201ENST00000288986 TAP1Q03518 808 aa16.69■□□□□ 0.26
NCK1-201ENST00000288986 SLC10A6Q3KNW5 377 aa16.69■□□□□ 0.26
NCK1-201ENST00000288986 GLRA4Q5JXX5 417 aa16.69■□□□□ 0.26
NCK1-201ENST00000288986 TMC6Q7Z403 805 aa16.69■□□□□ 0.26
NCK1-201ENST00000288986 TEX33O43247 280 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 EXOC3O60645 756 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 FGFR1OPO95684 399 aaKnown RBP16.68■□□□□ 0.26
NCK1-201ENST00000288986 THP07101 528 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 FKBP3Q00688 224 aaKnown RBP16.68■□□□□ 0.26
NCK1-201ENST00000288986 PPP2R3AQ06190 1150 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 TBX2Q13207 712 aaPredicted RBP16.68■□□□□ 0.26
NCK1-201ENST00000288986 ENOX2Q16206 610 aaKnown RBP16.68■□□□□ 0.26
NCK1-201ENST00000288986 FILIP1LQ4L180 1135 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 CRELD2Q6UXH1 353 aaPredicted RBP16.68■□□□□ 0.26
NCK1-201ENST00000288986 ALKAL1Q6UXT8 129 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 ZNF280BQ86YH2 543 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 XXYLT1Q8NBI6 393 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 SNX27Q96L92 541 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 CERS4Q9HA82 394 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 PLAGL2Q9UPG8 496 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 SMIM28A0A1B0GU29 152 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 ZC3H11AO75152 810 aaKnown RBP eCLIP16.68■□□□□ 0.26
NCK1-201ENST00000288986 CNOT6LQ96LI5 555 aaKnown RBP16.68■□□□□ 0.26
NCK1-201ENST00000288986 CEP63Q96MT8 703 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 TGS1Q96RS0 853 aaKnown RBP16.68■□□□□ 0.26
NCK1-201ENST00000288986 C17orf80Q9BSJ5 609 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 CWH43Q9H720 699 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 PLEKHA5Q9HAU0 1116 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 KIAA1586Q9HCI6 787 aa16.68■□□□□ 0.26
NCK1-201ENST00000288986 ITIH6Q6UXX5 1313 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 TTC26A0AVF1 554 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 ZNF233A6NK53 670 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 LACTBL1A8MY62 500 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 PTGESO14684 152 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 INPPL1O15357 1258 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 MEFVO15553 781 aaPredicted RBP16.67■□□□□ 0.26
NCK1-201ENST00000288986 DDHD2O94830 711 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 NR3C1P04150 777 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 ALDH7A1P49419 539 aaKnown RBP16.67■□□□□ 0.26
NCK1-201ENST00000288986 MARSP56192 900 aaKnown RBP16.67■□□□□ 0.26
NCK1-201ENST00000288986 GRIK3Q13003 919 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 NFIL3Q16649 462 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 SPRED2Q7Z698 418 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 FILIP1Q7Z7B0 1213 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 CBWD2Q8IUF1 395 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 C12orf56Q8IXR9 622 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 CACTINQ8WUQ7 758 aaKnown RBP16.67■□□□□ 0.26
NCK1-201ENST00000288986 CLP1Q92989 425 aaKnown RBP16.67■□□□□ 0.26
NCK1-201ENST00000288986 ZNF576Q9H609 170 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 NRDE2Q9H7Z3 1164 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 TAB2Q9NYJ8 693 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 RBAKQ9NYW8 714 aaPredicted RBP16.67■□□□□ 0.26
NCK1-201ENST00000288986 CNTN3Q9P232 1028 aa16.67■□□□□ 0.26
NCK1-201ENST00000288986 MAGEC2Q9UBF1 373 aaPredicted RBP16.67■□□□□ 0.26
NCK1-201ENST00000288986 LGALS16A8MUM7 142 aa16.66■□□□□ 0.26
NCK1-201ENST00000288986 NR2F2P24468 414 aa16.66■□□□□ 0.26
NCK1-201ENST00000288986 RPL13P26373 211 aaKnown RBP16.66■□□□□ 0.26
NCK1-201ENST00000288986 PBX3P40426 434 aa16.66■□□□□ 0.26
NCK1-201ENST00000288986 ADAM9Q13443 819 aa16.66■□□□□ 0.26
NCK1-201ENST00000288986 SNRNP35Q16560 246 aaKnown RBP16.66■□□□□ 0.26
NCK1-201ENST00000288986 FNDC1Q4ZHG4 1894 aaPredicted RBP16.66■□□□□ 0.26
NCK1-201ENST00000288986 XKR4Q5GH76 650 aa16.66■□□□□ 0.26
NCK1-201ENST00000288986 SPECC1LQ69YQ0 1117 aa16.66■□□□□ 0.26
NCK1-201ENST00000288986 LRRC8AQ8IWT6 810 aa16.66■□□□□ 0.26
NCK1-201ENST00000288986 GBF1Q92538 1859 aa16.66■□□□□ 0.26
NCK1-201ENST00000288986 EEF2KMTQ96G04 330 aa16.66■□□□□ 0.26
NCK1-201ENST00000288986 ZNF830Q96NB3 372 aaPredicted RBP16.66■□□□□ 0.26
NCK1-201ENST00000288986 ZMAT2Q96NC0 199 aaKnown RBP16.66■□□□□ 0.26
NCK1-201ENST00000288986 AAASQ9NRG9 546 aa16.66■□□□□ 0.26
NCK1-201ENST00000288986 DNAJB4Q9UDY4 337 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms