RNA–Protein interactions for RNA: ENST00000272424.9

TPRKB-201, Transcript of TP53RK binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPRKB, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKB-201ENST00000272424 TDRD15B5MCY1 1934 aaKnown RBP11.54□□□□□ -0.56
TPRKB-201ENST00000272424 PER2O15055 1255 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 FAM13AO94988 1023 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 NPTXRO95502 500 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 DDIT3P35638 169 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 KRT85P78386 507 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 MAPK6Q16659 721 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 CCDC73Q6ZRK6 1079 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 ABI1Q8IZP0 508 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 VN1R2Q8NFZ6 395 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 LEO1Q8WVC0 666 aaPredicted RBP11.53□□□□□ -0.56
TPRKB-201ENST00000272424 STAMQ92783 540 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 DHX58Q96C10 678 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 SPATA32Q96LK8 384 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 CASD1Q96PB1 797 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 TIPINQ9BVW5 301 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 CCDC113Q9H0I3 377 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 FZD8Q9H461 694 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 GDPD2Q9HCC8 539 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 PRMT7Q9NVM4 692 aaPredicted RBP11.53□□□□□ -0.56
TPRKB-201ENST00000272424 STK17AQ9UEE5 414 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 CDH22Q9UJ99 828 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 RCOR1Q9UKL0 485 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 PLAGL2Q9UPG8 496 aa11.53□□□□□ -0.56
TPRKB-201ENST00000272424 MYMKA6NI61 221 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 ITGB1P05556 798 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 PLS3P13797 630 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 AXLP30530 894 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 ANP32AP39687 249 aaKnown RBP11.52□□□□□ -0.57
TPRKB-201ENST00000272424 RAB27AP51159 221 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 WNT7BP56706 349 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 NCBP1Q09161 790 aaKnown RBP11.52□□□□□ -0.57
TPRKB-201ENST00000272424 PRPF4BQ13523 1007 aaKnown RBP11.52□□□□□ -0.57
TPRKB-201ENST00000272424 GIT2Q14161 759 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 EEF1DP3Q658K8 133 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 TAS1R3Q7RTX0 852 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 MYCT1Q8N699 235 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 SMG8Q8ND04 991 aaKnown RBP11.52□□□□□ -0.57
TPRKB-201ENST00000272424 TRIM6Q9C030 488 aaPredicted RBP11.52□□□□□ -0.57
TPRKB-201ENST00000272424 TMEM117Q9H0C3 514 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 NXF3Q9H4D5 531 aaKnown RBP11.52□□□□□ -0.57
TPRKB-201ENST00000272424 PDZD7Q9H5P4 517 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 TYW1Q9NV66 732 aaKnown RBP11.52□□□□□ -0.57
TPRKB-201ENST00000272424 KCND2Q9NZV8 630 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 ARHGAP28Q9P2N2 729 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 IPPQ9Y573 584 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 ATP6V1DQ9Y5K8 247 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 CNTNAP2Q9UHC6 1331 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 CITO14578 2027 aa11.52□□□□□ -0.57
TPRKB-201ENST00000272424 K7ERI5 159 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 ACKR2O00590 384 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 TBCAO75347 108 aaKnown RBP11.51□□□□□ -0.57
TPRKB-201ENST00000272424 EOMESO95936 686 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 SKIP12755 728 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 PBX3P40426 434 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 AFF1P51825 1210 aaKnown RBP11.51□□□□□ -0.57
TPRKB-201ENST00000272424 EFNA5P52803 228 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 NUCB2P80303 420 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 PCBP1Q15365 356 aaKnown RBP eCLIP11.51□□□□□ -0.57
TPRKB-201ENST00000272424 FAM187BQ17R55 369 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 NT5DC1Q5TFE4 455 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 SLC27A1Q6PCB7 646 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 AGMOQ6ZNB7 445 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 LRRC55Q6ZSA7 311 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 FAM43BQ6ZT52 329 aaPredicted RBP11.51□□□□□ -0.57
TPRKB-201ENST00000272424 SV2BQ7L1I2 683 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 SPPL3Q8TCT6 385 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 SUSD6Q92537 303 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 CLP1Q92989 425 aaKnown RBP11.51□□□□□ -0.57
TPRKB-201ENST00000272424 PRIMPOLQ96LW4 560 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 TRAIPQ9BWF2 469 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 CWH43Q9H720 699 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 ODF2LQ9ULJ1 636 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 PHLPP2Q6ZVD8 1323 aa11.51□□□□□ -0.57
TPRKB-201ENST00000272424 EP300Q09472 2414 aaPredicted RBP11.5□□□□□ -0.57
TPRKB-201ENST00000272424 A0A1B0GUA9 196 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 K7ENM7 598 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 N4BP3O15049 544 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 POLR2DO15514 142 aaKnown RBP11.5□□□□□ -0.57
TPRKB-201ENST00000272424 ZNF623O75123 536 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 OFD1O75665 1012 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 HARSP12081 509 aaKnown RBP11.5□□□□□ -0.57
TPRKB-201ENST00000272424 ITGA4P13612 1032 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 IDEP14735 1019 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 AKAP5P24588 427 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 NMT1P30419 496 aaKnown RBP11.5□□□□□ -0.57
TPRKB-201ENST00000272424 MLH1P40692 756 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 SMTNP53814 917 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 SKOR1P84550 965 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 ATF7IP2Q5U623 682 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 RESP18Q5W5W9 173 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 GLB1LQ6UWU2 654 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 MRPL10Q7Z7H8 261 aaKnown RBP11.5□□□□□ -0.57
TPRKB-201ENST00000272424 SFR1Q86XK3 245 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 LRRC43Q8N309 656 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 KLHL23Q8NBE8 558 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 COLGALT1Q8NBJ5 622 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 TMEM161BQ8NDZ6 487 aa11.5□□□□□ -0.57
TPRKB-201ENST00000272424 POF1BQ8WVV4 589 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms