RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 VTI1AQ96AJ9 217 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 SLC24A3Q9HC58 644 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 EIF4E1BA6NMX2 242 aaKnown RBP29.3■■■□□ 2.28
CBX4-201ENST00000269397 GRIN3BO60391 1043 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 ITGB5P18084 799 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 CCND1P24385 295 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 TMED2Q15363 201 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 SNRNP35Q16560 246 aaKnown RBP29.3■■■□□ 2.28
CBX4-201ENST00000269397 ACAD10Q6JQN1 1059 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 B3GNT9Q6UX72 402 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 CPA5Q8WXQ8 436 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 DDX1Q92499 740 aaKnown RBP29.3■■■□□ 2.28
CBX4-201ENST00000269397 PLVAPQ9BX97 442 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 GAS8O95995 478 aa29.29■■■□□ 2.28
CBX4-201ENST00000269397 TAC1P20366 129 aa29.29■■■□□ 2.28
CBX4-201ENST00000269397 GJC1P36383 396 aa29.29■■■□□ 2.28
CBX4-201ENST00000269397 HP1BP3Q5SSJ5 553 aaPredicted RBP29.29■■■□□ 2.28
CBX4-201ENST00000269397 BZW1Q7L1Q6 419 aaKnown RBP29.29■■■□□ 2.28
CBX4-201ENST00000269397 TRAIPQ9BWF2 469 aa29.29■■■□□ 2.28
CBX4-201ENST00000269397 ADAM33Q9BZ11 813 aa29.29■■■□□ 2.28
CBX4-201ENST00000269397 PITPNM3Q9BZ71 974 aa29.29■■■□□ 2.28
CBX4-201ENST00000269397 GSTTP1A0A1W2PQM5 241 aa29.29■■■□□ 2.28
CBX4-201ENST00000269397 PLS3P13797 630 aa29.29■■■□□ 2.28
CBX4-201ENST00000269397 MAGEB18Q96M61 343 aa29.29■■■□□ 2.28
CBX4-201ENST00000269397 ARHGEF10LQ9HCE6 1279 aa29.29■■■□□ 2.28
CBX4-201ENST00000269397 RALAP11233 206 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 RARRES1P49788 294 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 SLC8A3P57103 927 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 ARHGEF18Q6ZSZ5 1173 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 MAB21L3Q8N8X9 362 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 SLC17A8Q8NDX2 589 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 RASA4BC9J798 803 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 RASA4O43374 803 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 ADSSP30520 456 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 PDE6BP35913 854 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 TEX2Q8IWB9 1127 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 CSRNP1Q96S65 589 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 MUTP22033 750 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 MTFR1Q15390 333 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 TMEM237Q96Q45 408 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 FBXO28Q9NVF7 368 aa29.28■■■□□ 2.28
CBX4-201ENST00000269397 MROH7Q68CQ1 1323 aa29.27■■■□□ 2.28
CBX4-201ENST00000269397 KLRG2A4D1S0 409 aaPredicted RBP29.27■■■□□ 2.28
CBX4-201ENST00000269397 SSTR3P32745 418 aaPredicted RBP29.27■■■□□ 2.28
CBX4-201ENST00000269397 WDR4P57081 412 aaKnown RBP29.27■■■□□ 2.28
CBX4-201ENST00000269397 DNAJC3Q13217 504 aa29.27■■■□□ 2.28
CBX4-201ENST00000269397 TRIM6Q9C030 488 aaPredicted RBP29.27■■■□□ 2.28
CBX4-201ENST00000269397 LACTBP83111 547 aaPredicted RBP29.27■■■□□ 2.28
CBX4-201ENST00000269397 RNASELQ05823 741 aaKnown RBP29.27■■■□□ 2.28
CBX4-201ENST00000269397 KRT39Q6A163 491 aa29.27■■■□□ 2.28
CBX4-201ENST00000269397 UTP4Q969X6 686 aaKnown RBP29.27■■■□□ 2.28
CBX4-201ENST00000269397 KCNH7Q9NS40 1196 aa29.27■■■□□ 2.28
CBX4-201ENST00000269397 CDH16O75309 829 aa29.26■■■□□ 2.27
CBX4-201ENST00000269397 ATP11AP98196 1134 aa29.26■■■□□ 2.27
CBX4-201ENST00000269397 CLEC16AQ2KHT3 1053 aa29.26■■■□□ 2.27
CBX4-201ENST00000269397 CAPN12Q6ZSI9 719 aa29.26■■■□□ 2.27
CBX4-201ENST00000269397 ATL2Q8NHH9 583 aa29.26■■■□□ 2.27
CBX4-201ENST00000269397 IL31RAQ8NI17 732 aa29.26■■■□□ 2.27
CBX4-201ENST00000269397 MRRFQ96E11 262 aaKnown RBP29.26■■■□□ 2.27
CBX4-201ENST00000269397 MYLK2Q9H1R3 596 aa29.26■■■□□ 2.27
CBX4-201ENST00000269397 KIF9Q9HAQ2 790 aa29.26■■■□□ 2.27
CBX4-201ENST00000269397 ZNF219Q9P2Y4 722 aaPredicted RBP29.26■■■□□ 2.27
CBX4-201ENST00000269397 IZUMO3Q5VZ72 239 aa29.26■■■□□ 2.27
CBX4-201ENST00000269397 NT5C1BQ96P26 610 aa29.26■■■□□ 2.27
CBX4-201ENST00000269397 SLCO1B3Q9NPD5 702 aa29.26■■■□□ 2.27
CBX4-201ENST00000269397 LRRC37AA6NMS7 1700 aa29.25■■■□□ 2.27
CBX4-201ENST00000269397 STRN3Q13033 797 aa29.25■■■□□ 2.27
CBX4-201ENST00000269397 ZNF365Q70YC5 407 aa29.25■■■□□ 2.27
CBX4-201ENST00000269397 C12orf56Q8IXR9 622 aa29.25■■■□□ 2.27
CBX4-201ENST00000269397 MXRA8Q9BRK3 442 aa29.25■■■□□ 2.27
CBX4-201ENST00000269397 ADGRA3Q8IWK6 1321 aa29.25■■■□□ 2.27
CBX4-201ENST00000269397 UNC5CO95185 931 aa29.25■■■□□ 2.27
CBX4-201ENST00000269397 SPP2Q13103 211 aa29.25■■■□□ 2.27
CBX4-201ENST00000269397 PARD3BQ8TEW8 1205 aa29.25■■■□□ 2.27
CBX4-201ENST00000269397 DDX27Q96GQ7 796 aaKnown RBP29.25■■■□□ 2.27
CBX4-201ENST00000269397 SLC5A4Q9NY91 659 aa29.25■■■□□ 2.27
CBX4-201ENST00000269397 P4HBP07237 508 aaKnown RBP29.24■■■□□ 2.27
CBX4-201ENST00000269397 ATP2A2P16615 1042 aaKnown RBP29.24■■■□□ 2.27
CBX4-201ENST00000269397 TARSP26639 723 aaKnown RBP29.24■■■□□ 2.27
CBX4-201ENST00000269397 GTF2BQ00403 316 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 FAM102BQ5T8I3 360 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 GRK7Q8WTQ7 553 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 ERP27Q96DN0 273 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 PLCD4Q9BRC7 762 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 DYNC1LI1Q9Y6G9 523 aaKnown RBP29.24■■■□□ 2.27
CBX4-201ENST00000269397 SSR1P43307 286 aaKnown RBP29.24■■■□□ 2.27
CBX4-201ENST00000269397 ANKRD20A2Q5SQ80 823 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 ANKRD20A1Q5TYW2 823 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 ANKRD20A3Q5VUR7 823 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 RNF43Q68DV7 783 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 ANKS1BQ7Z6G8 1248 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 KIFAP3Q92845 792 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 KLHL11Q9NVR0 708 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 RAB20Q9NX57 234 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 NKX1-2Q9UD57 310 aaPredicted RBP29.24■■■□□ 2.27
CBX4-201ENST00000269397 LGALS13Q9UHV8 139 aa29.24■■■□□ 2.27
CBX4-201ENST00000269397 LY75O60449 1722 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 SORBS3O60504 671 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 CCNB1P14635 433 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 UGCGQ16739 394 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms