RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ZBTB6Q15916 424 aa13.86□□□□□ -0.19
SS18-202ENST00000269138 KLHL10Q6JEL2 608 aa13.86□□□□□ -0.19
SS18-202ENST00000269138 XXYLT1Q8NBI6 393 aa13.86□□□□□ -0.19
SS18-202ENST00000269138 SPPL3Q8TCT6 385 aa13.86□□□□□ -0.19
SS18-202ENST00000269138 MYLIPQ8WY64 445 aa13.86□□□□□ -0.19
SS18-202ENST00000269138 TMEM175Q9BSA9 504 aa13.86□□□□□ -0.19
SS18-202ENST00000269138 C11orf84Q9BUA3 381 aaPredicted RBP13.86□□□□□ -0.19
SS18-202ENST00000269138 GTPBP4Q9BZE4 634 aaKnown RBP13.86□□□□□ -0.19
SS18-202ENST00000269138 PDE11AQ9HCR9 933 aa13.86□□□□□ -0.19
SS18-202ENST00000269138 MARCH5Q9NX47 278 aa13.86□□□□□ -0.19
SS18-202ENST00000269138 RBAKQ9NYW8 714 aaPredicted RBP13.86□□□□□ -0.19
SS18-202ENST00000269138 TUBGCP4Q9UGJ1 667 aa13.86□□□□□ -0.19
SS18-202ENST00000269138 KIAA1671Q9BY89 1806 aa13.86□□□□□ -0.19
SS18-202ENST00000269138 SZT2Q5T011 3432 aa13.86□□□□□ -0.19
SS18-202ENST00000269138 TRIM49BA6NDI0 452 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 ZNF233A6NK53 670 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 EXOC3O60645 756 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 CSPG5O95196 566 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 POU5F1Q01860 360 aaKnown RBP13.85□□□□□ -0.19
SS18-202ENST00000269138 SNRNP35Q16560 246 aaKnown RBP13.85□□□□□ -0.19
SS18-202ENST00000269138 ANKRD40Q6AI12 368 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 CENPPQ6IPU0 288 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 SLC9A9Q8IVB4 645 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 EFCAB13Q8IY85 973 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 TRIML1Q8N9V2 468 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 P2RX5Q93086 422 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 EEF2KMTQ96G04 330 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 IGSF21Q96ID5 467 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 VN1R3Q9BXE9 311 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 TMEM63CQ9P1W3 806 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 IL18RAPO95256 599 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 NR2F2P24468 414 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 CLCNKBP51801 687 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 CYP24A1Q07973 514 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 CAMK1Q14012 370 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 CD300LGQ6UXG3 332 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 RBM43Q6ZSC3 357 aaKnown RBP13.85□□□□□ -0.19
SS18-202ENST00000269138 CD302Q8IX05 232 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 PLEKHO2Q8TD55 490 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 HASPINQ8TF76 798 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 NELFBQ8WX92 580 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 DHTKD1Q96HY7 919 aaPredicted RBP13.85□□□□□ -0.19
SS18-202ENST00000269138 ASB7Q9H672 318 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 KIAA1586Q9HCI6 787 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 SLC38A7Q9NVC3 462 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 CTNND2Q9UQB3 1225 aa13.85□□□□□ -0.19
SS18-202ENST00000269138 MYO9BQ13459 2157 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 TRIP11Q15643 1979 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 PTPRJQ12913 1337 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 PSMA7O14818 248 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 KIF4AO95239 1232 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 CCNE1P24864 410 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 PPM1AP35813 382 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 STX17P56962 302 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 PLCB3Q01970 1234 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 ADAM9Q13443 819 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 STIM1Q13586 685 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 MYBPC2Q14324 1141 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 HSP90AA2PQ14568 343 aaPredicted RBP13.84□□□□□ -0.19
SS18-202ENST00000269138 TMEM132DQ14C87 1099 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 NFIL3Q16649 462 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 UPP1Q16831 310 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 CCDC183Q5T5S1 534 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 CEP135Q66GS9 1140 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 LMBRD2Q68DH5 695 aaPredicted RBP13.84□□□□□ -0.19
SS18-202ENST00000269138 SCARA3Q6AZY7 606 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 CAVIN1Q6NZI2 390 aaKnown RBP13.84□□□□□ -0.19
SS18-202ENST00000269138 TAS1R1Q7RTX1 841 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 TMEM174Q8WUU8 243 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 POF1BQ8WVV4 589 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 MFSD14AQ96MC6 490 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 POP1Q99575 1024 aaKnown RBP13.84□□□□□ -0.19
SS18-202ENST00000269138 COLEC11Q9BWP8 271 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 GZF1Q9H116 711 aaPredicted RBP13.84□□□□□ -0.19
SS18-202ENST00000269138 UBQLN1Q9UMX0 589 aaKnown RBP13.84□□□□□ -0.19
SS18-202ENST00000269138 PCDHGC5Q9Y5F6 944 aa13.84□□□□□ -0.19
SS18-202ENST00000269138 NLRC5Q86WI3 1866 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 PODXLO00592 558 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 PPEF2O14830 753 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 AKAP3O75969 853 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 IGFBP4P22692 258 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 IRS1P35568 1242 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 NLRP12P59046 1061 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 ERVFC1P60507 584 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 TFAMQ00059 246 aaKnown RBP13.83□□□□□ -0.2
SS18-202ENST00000269138 PSMD6Q15008 389 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 EDRF1Q3B7T1 1238 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 DPCR1Q3MIW9 517 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 SPATA1Q5VX52 437 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 TTI2Q6NXR4 508 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 C3orf58Q8NDZ4 430 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 CCDC127Q96BQ5 260 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 TMEM169Q96HH4 297 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 MED15Q96RN5 788 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 TSG101Q99816 390 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 DUSP9Q99956 384 aaKnown RBP13.83□□□□□ -0.2
SS18-202ENST00000269138 DERAQ9Y315 318 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 C2CD2Q9Y426 696 aa13.83□□□□□ -0.2
SS18-202ENST00000269138 TDRD15B5MCY1 1934 aaKnown RBP13.83□□□□□ -0.2
SS18-202ENST00000269138 RALGAPA2Q2PPJ7 1873 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms