RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 COX10Q12887 443 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 COG2Q14746 738 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 PASD1Q8IV76 773 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 VPS37AQ8NEZ2 397 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 TUBGCP4Q9UGJ1 667 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 STAP2Q9UGK3 403 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 CDC42BPGQ6DT37 1551 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 LMTK3Q96Q04 1460 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 TPP2P29144 1249 aaPredicted RBP12.7□□□□□ -0.38
SRRM4-201ENST00000267260 SERPINB9P50453 376 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 AP3M2P53677 418 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 XXYLT1Q8NBI6 393 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 CENPXA8MT69 81 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 USP1O94782 785 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 SERPINH1P50454 418 aaKnown RBP12.7□□□□□ -0.38
SRRM4-201ENST00000267260 KRT76Q01546 638 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 RANBP17Q9H2T7 1088 aaKnown RBP12.7□□□□□ -0.38
SRRM4-201ENST00000267260 AGTP01019 485 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 BYSLQ13895 437 aaKnown RBP12.7□□□□□ -0.38
SRRM4-201ENST00000267260 TRIP10Q15642 601 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 ANKRD49Q8WVL7 239 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 USP44Q9H0E7 712 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 PDE8BO95263 885 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 ANXA11P50995 505 aaKnown RBP12.7□□□□□ -0.38
SRRM4-201ENST00000267260 SRP72O76094 671 aaKnown RBP12.7□□□□□ -0.38
SRRM4-201ENST00000267260 TRPM8Q7Z2W7 1104 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 OR8H2Q8N162 312 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 C17orf80Q9BSJ5 609 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 SPAG6O75602 509 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
SRRM4-201ENST00000267260 A1BGP04217 495 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 MYL2P10916 166 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 LRRC74AQ0VAA2 488 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 PKN2Q16513 984 aaKnown RBP12.7□□□□□ -0.38
SRRM4-201ENST00000267260 NSUN7Q8NE18 718 aaKnown RBP12.7□□□□□ -0.38
SRRM4-201ENST00000267260 KRT35Q92764 455 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 CNPY3Q9BT09 278 aa12.7□□□□□ -0.38
SRRM4-201ENST00000267260 C20orf96Q9NUD7 363 aaPredicted RBP12.7□□□□□ -0.38
SRRM4-201ENST00000267260 MAP3K20Q9NYL2 800 aaKnown RBP12.7□□□□□ -0.38
SRRM4-201ENST00000267260 EVPLLA8MZ36 301 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 CLASP2O75122 1294 aaKnown RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 PCCAP05165 728 aaPredicted RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 UBTFL6P0CB48 400 aaPredicted RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 CCDC81Q6ZN84 652 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 DDX17Q92841 729 aaKnown RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 THTPAQ9BU02 230 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 KPNA4O00629 521 aaPredicted RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 EIF3HO15372 352 aaKnown RBP eCLIP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 MDH1P40925 334 aaKnown RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 CCDC60Q8IWA6 550 aaPredicted RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 PGBD4Q96DM1 585 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 CYFIP2Q96F07 1278 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 ANKRD27Q96NW4 1050 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 NMRK1Q9NWW6 199 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 MRPL39Q9NYK5 338 aaKnown RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 DNAJC12Q9UKB3 198 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 ATP7AQ04656 1500 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 CYP2C19P33261 490 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 ARSEP51690 589 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 PEX3P56589 373 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 CHMP1BQ7LBR1 199 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 ZNF473Q8WTR7 871 aaKnown RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 CNDP1Q96KN2 507 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 TJP2Q9UDY2 1190 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 MLNP12872 115 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 GYG1P46976 350 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 TMEM270Q6UE05 265 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 BTN2A1Q7KYR7 527 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 KIAA0825Q8IV33 1275 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 ATAD3AQ9NVI7 634 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 TEX28O15482 410 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 PDE9AO76083 593 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 RALAP11233 206 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 ENO3P13929 434 aaPredicted RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 BCAR1P56945 870 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 OSTNP61366 133 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 ZBTB10Q96DT7 871 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 TTC7AQ9ULT0 858 aaPredicted RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 CFAP99D6REC4 459 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 NR3C1P04150 777 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 IFNAR1P17181 557 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 CEBPAP49715 358 aaPredicted RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 PUDPQ08623 228 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 ZNF235Q14590 738 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 EPC1Q9H2F5 836 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 ERAP1Q9NZ08 941 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 MYO18AQ92614 2054 aaKnown RBP12.69□□□□□ -0.38
SRRM4-201ENST00000267260 FKBP9O95302 570 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 PLEKHA7Q6IQ23 1121 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 FKBP9P1Q75LS8 142 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 SEPT1Q8WYJ6 367 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 CATSPER2Q96P56 530 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 FBXL5Q9UKA1 691 aa12.69□□□□□ -0.38
SRRM4-201ENST00000267260 HIST1H2AGP0C0S8 130 aaPredicted RBP12.68□□□□□ -0.38
SRRM4-201ENST00000267260 HIST1H2ADP20671 130 aa12.68□□□□□ -0.38
SRRM4-201ENST00000267260 SCNN1DP51172 638 aa12.68□□□□□ -0.38
SRRM4-201ENST00000267260 VAMP7P51809 220 aa12.68□□□□□ -0.38
SRRM4-201ENST00000267260 CHRNDQ07001 517 aa12.68□□□□□ -0.38
SRRM4-201ENST00000267260 NLRP10Q86W26 655 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms