RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 TMEM132BQ14DG7 1078 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 CYP1B1Q16678 543 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 ABHD15Q6UXT9 468 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 ZNF677Q86XU0 584 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 CCT8L2Q96SF2 557 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 PPANQ9NQ55 473 aaKnown RBP11.03□□□□□ -0.64
LSG1-201ENST00000265245 A1CFQ9NQ94 594 aaKnown RBP11.03□□□□□ -0.64
LSG1-201ENST00000265245 SLC12A6Q9UHW9 1150 aa11.03□□□□□ -0.64
LSG1-201ENST00000265245 SORBS3O60504 671 aa11.02□□□□□ -0.64
LSG1-201ENST00000265245 FAM107AO95990 144 aa11.02□□□□□ -0.64
LSG1-201ENST00000265245 COILP38432 576 aaPredicted RBP11.02□□□□□ -0.64
LSG1-201ENST00000265245 SEC24CP53992 1094 aa11.02□□□□□ -0.64
LSG1-201ENST00000265245 SLC20A2Q08357 652 aa11.02□□□□□ -0.64
LSG1-201ENST00000265245 EMC2Q15006 297 aa11.02□□□□□ -0.64
LSG1-201ENST00000265245 TTC27Q6P3X3 843 aa11.02□□□□□ -0.64
LSG1-201ENST00000265245 ZDHHC24Q6UX98 284 aa11.02□□□□□ -0.64
LSG1-201ENST00000265245 MYCBPAPQ8TBZ2 947 aa11.02□□□□□ -0.64
LSG1-201ENST00000265245 ZNF473Q8WTR7 871 aaKnown RBP11.02□□□□□ -0.64
LSG1-201ENST00000265245 ELMO3Q96BJ8 720 aa11.02□□□□□ -0.64
LSG1-201ENST00000265245 ZNF112Q9UJU3 913 aa11.02□□□□□ -0.64
LSG1-201ENST00000265245 ADAMTS5Q9UNA0 930 aa11.02□□□□□ -0.64
LSG1-201ENST00000265245 PTPN22Q9Y2R2 807 aa11.02□□□□□ -0.64
LSG1-201ENST00000265245 SPATA31C2B4DYI2 1134 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 ATP2A1O14983 1001 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 GRIN3BO60391 1043 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 ECEL1O95672 775 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 SUPT20HL2P0C7V6 817 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 MYBL1P10243 752 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 SCP2P22307 547 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 NSFP46459 744 aaKnown RBP11.02□□□□□ -0.65
LSG1-201ENST00000265245 RPL21P46778 160 aaKnown RBP11.02□□□□□ -0.65
LSG1-201ENST00000265245 CALCOCO2Q13137 446 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 PPP1R7Q15435 360 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 SUPT20HL1Q3ZLR7 823 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 CROCCP2Q86T23 111 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 TADA2BQ86TJ2 420 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 GRHL1Q9NZI5 618 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.02□□□□□ -0.65
LSG1-201ENST00000265245 RARAP10276 462 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 PIK3CAP42336 1068 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 SLMAPQ14BN4 828 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 PSMD6Q15008 389 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 TAS1R3Q7RTX0 852 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 ZDHHC14Q8IZN3 488 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 DEPTORQ8TB45 409 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 FAM129AQ9BZQ8 928 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 CNOT10Q9H9A5 744 aaKnown RBP11.02□□□□□ -0.65
LSG1-201ENST00000265245 AVENQ9NQS1 362 aaPredicted RBP11.02□□□□□ -0.65
LSG1-201ENST00000265245 HOXC10Q9NYD6 342 aa11.02□□□□□ -0.65
LSG1-201ENST00000265245 AGO2Q9UKV8 859 aaKnown RBP11.02□□□□□ -0.65
LSG1-201ENST00000265245 TCRBV7S2A1N4TA0A589 114 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 BYSLQ13895 437 aaKnown RBP11.01□□□□□ -0.65
LSG1-201ENST00000265245 ZACNQ401N2 412 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 SGO2Q562F6 1265 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 LMBRD2Q68DH5 695 aaPredicted RBP11.01□□□□□ -0.65
LSG1-201ENST00000265245 C15orf39Q6ZRI6 1047 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 CYFIP1Q7L576 1253 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 RPAINQ86UA6 219 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 MAIP1Q8WWC4 291 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 SLC7A3Q8WY07 619 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 PPP1R1BQ9UD71 204 aaPredicted RBP11.01□□□□□ -0.65
LSG1-201ENST00000265245 DICER1Q9UPY3 1922 aaKnown RBP11.01□□□□□ -0.65
LSG1-201ENST00000265245 GMNCA6NCL1 334 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 LRRIQ4A6NIV6 560 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 CLDN3O15551 220 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 HLA-DRAP01903 254 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 POTEJP0CG39 1038 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 SLC1A1P43005 524 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 STXBP2Q15833 593 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 SLFN12LQ6IEE8 588 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 CPNE8Q86YQ8 564 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 APOBEC3FQ8IUX4 373 aaKnown RBP11.01□□□□□ -0.65
LSG1-201ENST00000265245 MCOLN2Q8IZK6 566 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 C12orf50Q8NA57 414 aaPredicted RBP11.01□□□□□ -0.65
LSG1-201ENST00000265245 PSPC1Q8WXF1 523 aaKnown RBP11.01□□□□□ -0.65
LSG1-201ENST00000265245 LRRC19Q9H756 370 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 ZNF302Q9NR11 478 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 TELO2Q9Y4R8 837 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 K7ERI5 159 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 UNGP13051 313 aaPredicted RBP11.01□□□□□ -0.65
LSG1-201ENST00000265245 ACOT2P49753 483 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 CLDN10P78369 228 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 R3HDM1Q15032 1099 aaKnown RBP11.01□□□□□ -0.65
LSG1-201ENST00000265245 PRAMEF18Q5VWM3 479 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 CATSPERGQ6ZRH7 1159 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 OTUD6BQ8N6M0 293 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 C3orf20Q8ND61 904 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 TMEM143Q96AN5 459 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 MAF1Q9H063 256 aa11.01□□□□□ -0.65
LSG1-201ENST00000265245 ATXN2Q99700 1313 aaKnown RBP11.01□□□□□ -0.65
LSG1-201ENST00000265245 TLDC2A0PJX2 215 aa11□□□□□ -0.65
LSG1-201ENST00000265245 OATP04181 439 aa11□□□□□ -0.65
LSG1-201ENST00000265245 RRM1P23921 792 aa11□□□□□ -0.65
LSG1-201ENST00000265245 TMOD1P28289 359 aa11□□□□□ -0.65
LSG1-201ENST00000265245 KCNJ1P48048 391 aa11□□□□□ -0.65
LSG1-201ENST00000265245 SATB1Q01826 763 aa11□□□□□ -0.65
LSG1-201ENST00000265245 SLC29A2Q14542 456 aa11□□□□□ -0.65
LSG1-201ENST00000265245 ANGEL2Q5VTE6 544 aaKnown RBP11□□□□□ -0.65
LSG1-201ENST00000265245 MICALL1Q8N3F8 863 aa11□□□□□ -0.65
LSG1-201ENST00000265245 CPA5Q8WXQ8 436 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms