RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 ADRB2P07550 413 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 CLTAP09496 248 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 TUSC3Q13454 348 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 ALCAMQ13740 583 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 SCARA3Q6AZY7 606 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 KLHL10Q6JEL2 608 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 HS2ST1Q7LGA3 356 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 TMC7Q7Z402 723 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 EFCAB13Q8IY85 973 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 VPS52Q8N1B4 723 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 ZNF507Q8TCN5 953 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 GPT2Q8TD30 523 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 CCDC47Q96A33 483 aaKnown RBP7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 CCDC34Q96HJ3 373 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 SAMD11Q96NU1 681 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 PPP1R10Q96QC0 940 aaKnown RBP7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 IGFLR1Q9H665 355 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 TMEM206Q9H813 350 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 PDE11AQ9HCR9 933 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 TLR9Q9NR96 1032 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 RBAKQ9NYW8 714 aaPredicted RBP7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 CPSF3Q9UKF6 684 aaKnown RBP7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 RWDD3Q9Y3V2 267 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 PTPRJQ12913 1337 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 TTC26A0AVF1 554 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 TRIM49BA6NDI0 452 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 B3GAT3O94766 335 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 MYL1P05976 194 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 PPM1AP35813 382 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 BRCC3P46736 316 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 CASP4P49662 377 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 HSP90AA2PQ14568 343 aaPredicted RBP7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 KNOP1Q1ED39 458 aaKnown RBP7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 TCEAL5Q5H9L2 206 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 KANK3Q6NY19 840 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 TAS1R1Q7RTX1 841 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 CEP57Q86XR8 500 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 P2RX5Q93086 422 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 CCDC127Q96BQ5 260 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 GPR62Q9BZJ7 368 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 CNTN3Q9P232 1028 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 KANSL3Q9P2N6 904 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 MAN1B1Q9UKM7 699 aa7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 TCF20Q9UGU0 1960 aaKnown RBP7.88□□□□□ -1.15
DEPDC1B-201ENST00000265036 DOCK6Q96HP0 2047 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 INPPL1O15357 1258 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 ALDH2P05091 517 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 DLATP10515 647 aaKnown RBP7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 RPL17P18621 184 aaKnown RBP7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 BMP6P22004 513 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 TFAMQ00059 246 aaKnown RBP7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 TFF2Q03403 129 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 CLUL1Q15846 466 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 SLFN12LQ6IEE8 588 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 ALKAL1Q6UXT8 129 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 GPD1LQ8N335 351 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 ELMO3Q96BJ8 720 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 MRPL38Q96DV4 380 aaKnown RBP7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 PLVAPQ9BX97 442 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 STYXL1Q9Y6J8 313 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 UBE4BO95155 1302 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 PODXLO00592 558 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 LINC01565O15544 149 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 EXOC3O60645 756 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 CLSTN1O94985 981 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 SMC2O95347 1197 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 RB1P06400 928 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 CD44P16070 742 aaKnown RBP7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 PRCPP42785 496 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 NRIP1P48552 1158 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 KRT17Q04695 432 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 TMEM132DQ14C87 1099 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 SNRNP35Q16560 246 aaKnown RBP7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 BMT2Q1RMZ1 405 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 CEP135Q66GS9 1140 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 LLGL2Q6P1M3 1020 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 FUT10Q6P4F1 479 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 KCNN1Q92952 543 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 TIGD1Q96MW7 591 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 POP1Q99575 1024 aaKnown RBP7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 MTMR12Q9C0I1 747 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 KCTD10Q9H3F6 313 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 HOOK1Q9UJC3 728 aaKnown RBP7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 ADAM28Q9UKQ2 775 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 STXBP5LQ9Y2K9 1186 aa7.87□□□□□ -1.15
DEPDC1B-201ENST00000265036 GOLGA6L22H0YM25 854 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 H3BQ06 376 aaPredicted RBP7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 TADA2AO75478 443 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 NR3C1P04150 777 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 GARTP22102 1010 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 ABCD1P33897 745 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 PMS1P54277 932 aaKnown RBP7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 STX17P56962 302 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 KCNB1Q14721 858 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 PTPROQ16827 1216 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 RTP2Q5QGT7 225 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 FAM171A1Q5VUB5 890 aa7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 PRSS55Q6UWB4 352 aaPredicted RBP7.86□□□□□ -1.15
DEPDC1B-201ENST00000265036 CLEC17AQ6ZS10 378 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms