RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 KCNA1Q09470 495 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 EDRF1Q3B7T1 1238 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 PRAMEF18Q5VWM3 479 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 RBBP8NLQ8NC74 664 aaPredicted RBP17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 NUDT12Q9BQG2 462 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 CENPKQ9BS16 269 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 ZFATQ9P243 1243 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 ZFP69BQ9UJL9 534 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 CDC42BPBQ9Y5S2 1711 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 TBCCQ15814 346 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 ATF7IP2Q5U623 682 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 DCP1BQ8IZD4 617 aaKnown RBP17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 PPHLN1Q8NEY8 458 aaKnown RBP17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 SENP7Q9BQF6 1050 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 TEX12Q9BXU0 123 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 JMJD4Q9H9V9 463 aa17.78■□□□□ 0.44
CROCCP3-201ENST00000263511 SPATA31A5Q5VU36 1347 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 SPATA31A7Q8IWB4 1347 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 KRT17Q04695 432 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 CCDC195A0A1B0GUA6 201 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 PSMD3O43242 534 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 DIAPH2O60879 1101 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 RGS7P49802 495 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 E2F4Q16254 413 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 HIF1AQ16665 826 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 DGKDQ16760 1214 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 TRIM4Q9C037 500 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 RRN3P2A6NIE6 340 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 FOXP2O15409 715 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 TADA3O75528 432 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 HAUS5O94927 633 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 PCSK1P29120 753 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 SNRPFP62306 86 aaKnown RBP17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 SLC18A3Q16572 532 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 CCDC144BQ3MJ40 725 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 TEDDM1Q5T9Z0 273 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 RNF135Q8IUD6 432 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 SLC13A1Q9BZW2 595 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 SPATS2LQ9NUQ6 558 aaKnown RBP17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 AIPL1Q9NZN9 384 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 HDAC6Q9UBN7 1215 aa17.77■□□□□ 0.44
CROCCP3-201ENST00000263511 MYO1CO00159 1063 aa17.77■□□□□ 0.43
CROCCP3-201ENST00000263511 LMNAP02545 664 aaKnown RBP17.77■□□□□ 0.43
CROCCP3-201ENST00000263511 PPP2R2AP63151 447 aa17.77■□□□□ 0.43
CROCCP3-201ENST00000263511 DPYDQ12882 1025 aa17.77■□□□□ 0.43
CROCCP3-201ENST00000263511 ANO4Q32M45 955 aa17.77■□□□□ 0.43
CROCCP3-201ENST00000263511 SV2CQ496J9 727 aa17.77■□□□□ 0.43
CROCCP3-201ENST00000263511 SPATA17Q96L03 361 aa17.77■□□□□ 0.43
CROCCP3-201ENST00000263511 SREBF2Q12772 1141 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 MTHFD1LQ6UB35 978 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 SYDE1Q6ZW31 735 aaPredicted RBP17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 CNPY4Q8N129 248 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 GGCXP38435 758 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 EFTUD2Q15029 972 aaKnown RBP eCLIP17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 PLA2G4FQ68DD2 849 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 SLC26A7Q8TE54 656 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 CYTH2Q99418 400 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 EPB41L4AQ9HCS5 686 aaPredicted RBP17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 PIK3R2O00459 728 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 KCNN4O15554 427 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 UPP2O95045 317 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 SETSIPP0DME0 302 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 LAMC2Q13753 1193 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 CDC42BPAQ5VT25 1732 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 MYMKA6NI61 221 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 ARFIP2P53365 341 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 TMEM62Q0P6H9 643 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 EFCAB12Q6NXP0 572 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 DDX53Q86TM3 631 aaKnown RBP17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 ATG4CQ96DT6 458 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 NT5C1AQ9BXI3 368 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 ANLNQ9NQW6 1124 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 IGSF9BQ9UPX0 1349 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 PRRG1O14668 218 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 PDGFRBP09619 1106 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 DDX5P17844 614 aaKnown RBP17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 NCAPHQ15003 741 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 RDM1Q8NG50 284 aa17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 ZNF512Q96ME7 567 aaPredicted RBP17.76■□□□□ 0.43
CROCCP3-201ENST00000263511 UNC13BO14795 1591 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 QRICH2Q9H0J4 1663 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 SSU72P8A0A1W2PR75 194 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 EIF3DO15371 548 aaKnown RBP eCLIP17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 SRGNP10124 158 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 UCHL3P15374 230 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 CPT1AP50416 773 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 PIGHQ14442 188 aaPredicted RBP17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 STKLD1Q8NE28 680 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 CPA5Q8WXQ8 436 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 POLR3CQ9BUI4 534 aaPredicted RBP17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 ASPSCR1Q9BZE9 553 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 CASS4Q9NQ75 786 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 ANKEF1Q9NU02 776 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 MYBP10242 640 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 RPA1P27694 616 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 ACADSBP45954 432 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 GNASQ5JWF2 1037 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 SAMD7Q7Z3H4 446 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 GSPT2Q8IYD1 628 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms