RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MINPP1Q9UNW1 487 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 UCHL3P15374 230 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 COMTP21964 271 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 RAP1GDS1P52306 607 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 C2CD6Q53TS8 623 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 NAIF1Q69YI7 327 aaPredicted RBP12.71□□□□□ -0.38
SMG6-201ENST00000263073 ISLR2Q6UXK2 745 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.71□□□□□ -0.38
SMG6-201ENST00000263073 USP6P35125 1406 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 MYMKA6NI61 221 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 CDC25CP30307 473 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 ERVK-24P63145 666 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 RCN1Q15293 331 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 TEDDM1Q5T9Z0 273 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 AFG1LQ8WV93 481 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 PI4K2AQ9BTU6 479 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 ADCY10Q96PN6 1610 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 WBP4O75554 376 aaKnown RBP12.7□□□□□ -0.38
SMG6-201ENST00000263073 CRKP46108 304 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 C3orf62Q6ZUJ4 267 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 MTBPQ96DY7 904 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 CCT7Q99832 543 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 RANBP17Q9H2T7 1088 aaKnown RBP12.7□□□□□ -0.38
SMG6-201ENST00000263073 DHX36Q9H2U1 1008 aaKnown RBP12.7□□□□□ -0.38
SMG6-201ENST00000263073 SETD1BQ9UPS6 1966 aaKnown RBP12.7□□□□□ -0.38
SMG6-201ENST00000263073 MBD5Q9P267 1494 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 KRT4P19013 534 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 AGGF1Q8N302 714 aaeCLIP12.7□□□□□ -0.382e-11■■■■□ 26.1
SMG6-201ENST00000263073 ROBO2Q9HCK4 1378 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 SMNDC1O75940 238 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMG6-201ENST00000263073 KRT7P08729 469 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 PLIN5Q00G26 463 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 REEP2Q9BRK0 252 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 FUT8Q9BYC5 575 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 ATP11BQ9Y2G3 1177 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 CPDO75976 1380 aa12.7□□□□□ -0.38
SMG6-201ENST00000263073 TPST1O60507 370 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 MAP3K6O95382 1288 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 SURF1Q15526 300 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 CHI3L2Q15782 390 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 FOXR1Q6PIV2 292 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 GPD1LQ8N335 351 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 MXD3Q9BW11 206 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 CAAP1Q9H8G2 361 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 ZC3H7BQ9UGR2 993 aaKnown RBP12.69□□□□□ -0.38
SMG6-201ENST00000263073 MYO3BQ8WXR4 1341 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 LINC00854A0A1B0GVQ3 168 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 ANGPT2O15123 496 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 CTDNEP1O95476 244 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 FAM107AO95990 144 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 JAK3P52333 1124 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 KIZQ2M2Z5 673 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 PLD3Q8IV08 490 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 ELMO2Q96JJ3 720 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 CDHR1Q96JP9 859 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 ZNF302Q9NR11 478 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 ADGRA2Q96PE1 1338 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 MROH9Q5TGP6 573 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 FRMD5Q7Z6J6 570 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 USP38Q8NB14 1042 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 DCAF4Q8WV16 495 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 TASP1Q9H6P5 420 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 DDX56Q9NY93 547 aaKnown RBP12.69□□□□□ -0.38
SMG6-201ENST00000263073 AIPL1Q9NZN9 384 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 PSMC3IPQ9P2W1 217 aaPredicted RBP12.69□□□□□ -0.38
SMG6-201ENST00000263073 GRAPQ13588 217 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 SNRNP48Q6IEG0 339 aaKnown RBP12.69□□□□□ -0.38
SMG6-201ENST00000263073 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 HAUS6Q7Z4H7 955 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 TTC30AQ86WT1 665 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 GRAPLQ8TC17 118 aaPredicted RBP12.69□□□□□ -0.38
SMG6-201ENST00000263073 C18orf8Q96DM3 657 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 ZNF335Q9H4Z2 1342 aaPredicted RBP12.69□□□□□ -0.38
SMG6-201ENST00000263073 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.69□□□□□ -0.38
SMG6-201ENST00000263073 PSMD14O00487 310 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 ZBTB24O43167 697 aaPredicted RBP12.69□□□□□ -0.38
SMG6-201ENST00000263073 MAGEA4P43358 317 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 FOXO4P98177 505 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 FAXCQ5TGI0 409 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 CCDC81Q6ZN84 652 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 GANCQ8TET4 914 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 TEKT4Q8WW24 435 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 APEX2Q9UBZ4 518 aa12.69□□□□□ -0.38
SMG6-201ENST00000263073 A8MXQ7 604 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 GFAPP14136 432 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 QARSP47897 775 aaKnown RBP12.68□□□□□ -0.38
SMG6-201ENST00000263073 ATG4AQ8WYN0 398 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 PBXIP1Q96AQ6 731 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 SENP7Q9BQF6 1050 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 FAM96AQ9H5X1 160 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 OLFML3Q9NRN5 406 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 PKD2L2Q9NZM6 624 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 MAD2L2Q9UI95 211 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 AGO2Q9UKV8 859 aaKnown RBP12.68□□□□□ -0.38
SMG6-201ENST00000263073 GGPS1O95749 300 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 WEE2P0C1S8 567 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 C6orf10Q5SRN2 563 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 USP6NLQ92738 828 aa12.68□□□□□ -0.38
SMG6-201ENST00000263073 MMTAG2Q9BU76 263 aaKnown RBP12.68□□□□□ -0.38
SMG6-201ENST00000263073 SPON2Q9BUD6 331 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms