RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 ST8SIA6P61647 398 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 VSNL1P62760 191 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 GUF1Q8N442 669 aaKnown RBP11.5□□□□□ -0.57
URB2-201ENST00000258243 STKLD1Q8NE28 680 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 SEPT5Q99719 369 aaPredicted RBP11.5□□□□□ -0.57
URB2-201ENST00000258243 SH3GL1Q99961 368 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 KCNH7Q9NS40 1196 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 VCAM1P19320 739 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 NMT1P30419 496 aaKnown RBP11.5□□□□□ -0.57
URB2-201ENST00000258243 STX3Q13277 289 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 ARHGAP15Q53QZ3 475 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 ZNF484Q5JVG2 852 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 LRRC71Q8N4P6 559 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 SOCS4Q8WXH5 440 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 CDCA5Q96FF9 252 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 C11orf70Q9BRQ4 267 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 PGK2P07205 417 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 MYBL1P10243 752 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 STILQ15468 1287 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 DDX53Q86TM3 631 aaKnown RBP11.5□□□□□ -0.57
URB2-201ENST00000258243 GMCL1P1Q8NEA9 526 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 OLFM3Q96PB7 478 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 SPON2Q9BUD6 331 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 TRIM17Q9Y577 477 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 SNX9Q9Y5X1 595 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 EMSYQ7Z589 1322 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 NPHP3-ACAD11A0A0J9YXS1 232 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 ARHGAP10A1A4S6 786 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 GAS2O43903 313 aaKnown RBP11.5□□□□□ -0.57
URB2-201ENST00000258243 ATN1P54259 1190 aaPredicted RBP11.5□□□□□ -0.57
URB2-201ENST00000258243 GPC5P78333 572 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 DCAF4L1Q3SXM0 396 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 PLA2G4FQ68DD2 849 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 FBXO28Q9NVF7 368 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 HSPBP1Q9NZL4 362 aa11.5□□□□□ -0.57
URB2-201ENST00000258243 NOP53Q9NZM5 478 aaKnown RBP11.5□□□□□ -0.57
URB2-201ENST00000258243 PYGLP06737 847 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 FOSL2P15408 326 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 CASP1P29466 404 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 CACNB2Q08289 660 aaPredicted RBP11.49□□□□□ -0.57
URB2-201ENST00000258243 TUBGCP3Q96CW5 907 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 CFAP36Q96G28 342 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 KLC2Q9H0B6 622 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 LOC102724159A0A0B4J2E5 919 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 ANO9A1A5B4 782 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 PDXKO00764 312 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 MSH2P43246 934 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 HDAC4P56524 1084 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 PWP2Q15269 919 aaKnown RBP11.49□□□□□ -0.57
URB2-201ENST00000258243 ZNF746Q6NUN9 644 aaPredicted RBP11.49□□□□□ -0.57
URB2-201ENST00000258243 TTC13Q8NBP0 860 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 AP1M1Q9BXS5 423 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 ANKEF1Q9NU02 776 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.49□□□□□ -0.57
URB2-201ENST00000258243 HDAC6Q9UBN7 1215 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 TMX2Q9Y320 296 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 ADGRB1O14514 1584 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 ZC3H4Q9UPT8 1303 aaKnown RBP11.49□□□□□ -0.57
URB2-201ENST00000258243 H3BRJ5 948 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 TEX33O43247 280 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 NPTXRO95502 500 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 FKBP1AP62942 108 aaKnown RBP11.49□□□□□ -0.57
URB2-201ENST00000258243 WDR72Q3MJ13 1102 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 DCLK2Q8N568 766 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 ASIC4Q96FT7 647 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 IP6K2Q9UHH9 426 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 LRG1P02750 347 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 SCP2P22307 547 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 ALDH1A3P47895 512 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 ACTR2P61160 394 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 DDR1Q08345 913 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 CUL1Q13616 776 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 LLGL1Q15334 1064 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 JADE1Q6IE81 842 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 PGBD3Q8N328 593 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 COG1Q8WTW3 980 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 DEPDC1BQ8WUY9 529 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 FMO2Q99518 471 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 C10orf88Q9H8K7 445 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 LGALS16A8MUM7 142 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 SLC16A3O15427 465 aaKnown RBP11.49□□□□□ -0.57
URB2-201ENST00000258243 TRPA1O75762 1119 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 EEF1B2P24534 225 aaKnown RBP11.49□□□□□ -0.57
URB2-201ENST00000258243 EIF3BP55884 814 aaKnown RBP11.49□□□□□ -0.57
URB2-201ENST00000258243 MTF1Q14872 753 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 FAM102AQ5T9C2 384 aaPredicted RBP11.49□□□□□ -0.57
URB2-201ENST00000258243 FRMD5Q7Z6J6 570 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 FAF2Q96CS3 445 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 ADAMTS1Q9UHI8 967 aa11.49□□□□□ -0.57
URB2-201ENST00000258243 HERVK_113P62684 666 aa11.48□□□□□ -0.57
URB2-201ENST00000258243 MGAT5BQ3V5L5 792 aa11.48□□□□□ -0.57
URB2-201ENST00000258243 LMBRD2Q68DH5 695 aaPredicted RBP11.48□□□□□ -0.57
URB2-201ENST00000258243 FBXO16Q8IX29 292 aaPredicted RBP11.48□□□□□ -0.57
URB2-201ENST00000258243 TMEM169Q96HH4 297 aa11.48□□□□□ -0.57
URB2-201ENST00000258243 ELAC2Q9BQ52 826 aaKnown RBP11.48□□□□□ -0.57
URB2-201ENST00000258243 SH2D3AQ9BRG2 576 aa11.48□□□□□ -0.57
URB2-201ENST00000258243 IRX2Q9BZI1 471 aaPredicted RBP11.48□□□□□ -0.57
URB2-201ENST00000258243 YIPF3Q9GZM5 350 aa11.48□□□□□ -0.57
URB2-201ENST00000258243 CHCHD3Q9NX63 227 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms