RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 ZNF467Q7Z7K2 595 aaPredicted RBP9.78□□□□□ -0.84
PDE6A-201ENST00000255266 VSIG10LQ86VR7 867 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 HSPH1Q92598 858 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 SELENOSQ9BQE4 189 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 OXCT2Q9BYC2 517 aaPredicted RBP9.78□□□□□ -0.84
PDE6A-201ENST00000255266 SLC28A3Q9HAS3 691 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 A0A087WZ62 844 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 PP2D1A8MPX8 630 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 B3GAT3O94766 335 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 UBA1P22314 1058 aaKnown RBP9.78□□□□□ -0.84
PDE6A-201ENST00000255266 RFC2P35250 354 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 PRCPP42785 496 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 ITGA7Q13683 1181 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 ZNF235Q14590 738 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 CXCL17Q6UXB2 119 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 LBX2Q6XYB7 198 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 DNAAF3Q8N9W5 541 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 FDXACB1Q9BRP7 624 aaPredicted RBP9.78□□□□□ -0.84
PDE6A-201ENST00000255266 CATSPERBQ9H7T0 1116 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 SAR1BQ9Y6B6 198 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 CYB561D2O14569 222 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 FBXO21O94952 628 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 YBX3P16989 372 aaKnown RBP eCLIP9.78□□□□□ -0.84
PDE6A-201ENST00000255266 CRYBB1P53674 252 aaPredicted RBP9.78□□□□□ -0.84
PDE6A-201ENST00000255266 SH3D19Q5HYK7 790 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 SCFD1Q8WVM8 642 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 RNPC3Q96LT9 517 aaKnown RBP9.78□□□□□ -0.84
PDE6A-201ENST00000255266 CNOT8Q9UFF9 292 aaKnown RBP9.78□□□□□ -0.84
PDE6A-201ENST00000255266 PCDHB5Q9Y5E4 795 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 TACC3Q9Y6A5 838 aa9.78□□□□□ -0.84
PDE6A-201ENST00000255266 KDM1AO60341 852 aa9.77□□□□□ -0.84
PDE6A-201ENST00000255266 PGK1P00558 417 aa9.77□□□□□ -0.84
PDE6A-201ENST00000255266 WDR49Q8IV35 697 aa9.77□□□□□ -0.84
PDE6A-201ENST00000255266 CDKL3Q8IVW4 592 aaPredicted RBP9.77□□□□□ -0.84
PDE6A-201ENST00000255266 SPIRE2Q8WWL2 714 aa9.77□□□□□ -0.84
PDE6A-201ENST00000255266 SKA1Q96BD8 255 aa9.77□□□□□ -0.84
PDE6A-201ENST00000255266 ASIC4Q96FT7 647 aa9.77□□□□□ -0.84
PDE6A-201ENST00000255266 CELF4Q9BZC1 486 aaKnown RBP9.77□□□□□ -0.84
PDE6A-201ENST00000255266 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.77□□□□□ -0.84
PDE6A-201ENST00000255266 RNF14Q9UBS8 474 aa9.77□□□□□ -0.84
PDE6A-201ENST00000255266 CDY2AQ9Y6F7 541 aa9.77□□□□□ -0.84
PDE6A-201ENST00000255266 CNTNAP2Q9UHC6 1331 aa9.77□□□□□ -0.84
PDE6A-201ENST00000255266 NPHP3-ACAD11A0A0J9YXS1 232 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 MIF4GDA9UHW6 222 aaKnown RBP9.77□□□□□ -0.85
PDE6A-201ENST00000255266 RHOBTB3O94955 611 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 SLC10A3P09131 477 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 TUFMP49411 452 aaKnown RBP9.77□□□□□ -0.85
PDE6A-201ENST00000255266 NPEPPSP55786 919 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 MYBPC2Q14324 1141 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 FAM102AQ5T9C2 384 aaPredicted RBP9.77□□□□□ -0.85
PDE6A-201ENST00000255266 TTC23LQ6PF05 361 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 KLHL7Q8IXQ5 586 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 CCDC110Q8TBZ0 833 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 CGRRF1Q99675 332 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 KCNK9Q9NPC2 374 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 GJB4Q9NTQ9 266 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 ANGPTL3Q9Y5C1 460 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 ELNP15502 786 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 CASP14P31944 242 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 AVPR1AP37288 418 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 NME3Q13232 169 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 KRT31Q15323 416 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 FYB2Q5VWT5 728 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 LRRC43Q8N309 656 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 ENGASEQ8NFI3 743 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 N4BP2L2Q92802 583 aaPredicted RBP9.77□□□□□ -0.85
PDE6A-201ENST00000255266 CYP3A43Q9HB55 503 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 OLA1Q9NTK5 396 aaKnown RBP9.77□□□□□ -0.85
PDE6A-201ENST00000255266 ABI2Q9NYB9 513 aaPredicted RBP9.77□□□□□ -0.85
PDE6A-201ENST00000255266 HPS5Q9UPZ3 1129 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 ZKSCAN5Q9Y2L8 839 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 Q9Y3F1 56 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 PPP1R12AO14974 1030 aaPredicted RBP9.77□□□□□ -0.85
PDE6A-201ENST00000255266 AOC2O75106 756 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 RTN3O95197 1032 aaPredicted RBP9.77□□□□□ -0.85
PDE6A-201ENST00000255266 CPP00450 1065 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 MBL2P11226 248 aaPredicted RBP9.77□□□□□ -0.85
PDE6A-201ENST00000255266 RWDD2BP57060 319 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 RABGAP1LQ5R372 815 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 ADGRF2Q8IZF7 708 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 SMC6Q96SB8 1091 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 KIFC3Q9BVG8 833 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 TARS2Q9BW92 718 aaKnown RBP9.77□□□□□ -0.85
PDE6A-201ENST00000255266 SLC25A13Q9UJS0 675 aa9.77□□□□□ -0.85
PDE6A-201ENST00000255266 SPATA31C2B4DYI2 1134 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 I3L4J1 428 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 BUB1O43683 1085 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 MOCS2O96007 188 aaPredicted RBP9.76□□□□□ -0.85
PDE6A-201ENST00000255266 DPCR1Q3MIW9 517 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 GLYCTKQ8IVS8 523 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 UBIAD1Q9Y5Z9 338 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 GIT2Q14161 759 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 C10orf120Q5SQS8 335 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 ACSF2Q96CM8 615 aaPredicted RBP9.76□□□□□ -0.85
PDE6A-201ENST00000255266 FSD1LQ9BXM9 530 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 KLC2Q9H0B6 622 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 DOLKQ9UPQ8 538 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 SLC37A4O43826 429 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 ITGB3P05106 788 aa9.76□□□□□ -0.85
PDE6A-201ENST00000255266 PFKMP08237 780 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms