RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ITPK1Q13572 414 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 ATP11CQ8NB49 1132 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 DBR1Q9UK59 544 aaKnown RBP19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 MRFAP1Q9Y605 127 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 RNF103-CHMP3A0A140T963 221 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 ZSCAN9O15535 394 aaPredicted RBP19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 RASA1P20936 1047 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 ACTR2P61160 394 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 VSNL1P62760 191 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 TNIP3Q96KP6 325 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 CAV1Q03135 178 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 GRIN1Q05586 938 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 ZFATQ9P243 1243 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 FMO5P49326 533 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 FXR1P51114 621 aaKnown RBP eCLIP19.71■□□□□ 0.753e-7■■□□□ 12.5
SMARCC1-201ENST00000254480 ANTXR2P58335 489 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 RBM46Q8TBY0 533 aaKnown RBP19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 GMPSP49915 693 aaPredicted RBP19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 EFNA5P52803 228 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 DPYDQ12882 1025 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 ACBD5Q5T8D3 534 aaPredicted RBP19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 SLC25A41Q8N5S1 370 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 RBBP8NLQ8NC74 664 aaPredicted RBP19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 OR2W6PQ8NHA6 318 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 LZICQ8WZA0 190 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 C9orf72Q96LT7 481 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 NR1H4Q96RI1 486 aaPredicted RBP19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 RABL6Q3YEC7 729 aaPredicted RBP19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 EFHBQ8N7U6 833 aa19.71■□□□□ 0.75
SMARCC1-201ENST00000254480 SYCE1LA8MT33 242 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 C2CD2LO14523 706 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 XKR3Q5GH77 459 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 CYP4A22Q5TCH4 519 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 DYRK4Q9NR20 520 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 KIF17Q9P2E2 1029 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 PTK2BQ14289 1009 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 NLRP14Q86W24 1093 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 CEP70Q8NHQ1 597 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 IL25Q9H293 177 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 ETNK1Q9HBU6 452 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 RAB6BQ9NRW1 208 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 CUL3Q13618 768 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 LRRC8EQ6NSJ5 796 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 GFAPP14136 432 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 ETFBP38117 255 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 TTC23LQ6PF05 361 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 CCDC33Q8N5R6 958 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 KLK14Q9P0G3 267 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 UCHL3P15374 230 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 C4orf33Q8N1A6 199 aa19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 MAP3K20Q9NYL2 800 aaKnown RBP19.7■□□□□ 0.74
SMARCC1-201ENST00000254480 KDSRQ06136 332 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 EFCAB12Q6NXP0 572 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 ZNF34Q8IZ26 560 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 ZKSCAN4Q969J2 545 aaPredicted RBP19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 MYCBPQ99417 103 aaPredicted RBP19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 KLF6Q99612 283 aaPredicted RBP19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 KIF2CQ99661 725 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 DGAT1O75907 488 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 HSD17B4P51659 736 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 IL31Q6EBC2 164 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 TRIM72Q6ZMU5 477 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 FBXO28Q9NVF7 368 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 PDIA5Q14554 519 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 ENOSF1Q7L5Y1 443 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 JMJD4Q9H9V9 463 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 TERF2Q15554 542 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 KIZQ2M2Z5 673 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 MGAT5BQ3V5L5 792 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 CATSPER3Q86XQ3 398 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 YAF2Q8IY57 180 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 SEPT1Q8WYJ6 367 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 ATG4CQ96DT6 458 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 SLC7A5P2Q9GIP4 190 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 LAMC1P11047 1609 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 GRID2IPA4D2P6 1211 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 IQCA1LA6NCM1 817 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 DNAJC8O75937 253 aaPredicted RBP19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 ORC2Q13416 577 aaPredicted RBP19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 GLRA4Q5JXX5 417 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 EPAS1Q99814 870 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 TRIM33Q9UPN9 1127 aa19.69■□□□□ 0.74
SMARCC1-201ENST00000254480 KCNB1Q14721 858 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 ATP6V1G3Q96LB4 118 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 TCP11X1B4DZS4 312 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 SEC24DO94855 1032 aaPredicted RBP19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 OR1G1P47890 313 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 NT5C2P49902 561 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 ADSSL1Q8N142 457 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 KCNH4Q9UQ05 1017 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 DAB2P98082 770 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 C2CD6Q53TS8 623 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 ZNF512Q96ME7 567 aaPredicted RBP19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 TAAR1Q96RJ0 339 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 SMARCAD1Q9H4L7 1026 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 A0A1W2PQC6 194 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 RBP5P82980 135 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms