RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 NINJ2Q9NZG7 142 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 ZMYM2Q9UBW7 1377 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 DENND3A2RUS2 1198 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 ACOT2P49753 483 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 IRX4P78413 519 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 ITIH4Q14624 930 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 FASTKD3Q14CZ7 662 aaKnown RBP12.73□□□□□ -0.37
USHBP1-201ENST00000252597 SNRNP35Q16560 246 aaKnown RBP12.73□□□□□ -0.37
USHBP1-201ENST00000252597 ANKRD20A2Q5SQ80 823 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 ANKRD20A1Q5TYW2 823 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 ANKRD20A3Q5VUR7 823 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 PIGWQ7Z7B1 504 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 ACCSQ96QU6 501 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 HSD17B14Q9BPX1 270 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 MYLK2Q9H1R3 596 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 CCPG1Q9ULG6 757 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 ZMYND8Q9ULU4 1186 aaPredicted RBP12.73□□□□□ -0.37
USHBP1-201ENST00000252597 LY75O60449 1722 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 DOCK2Q92608 1830 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 ADRB2P07550 413 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 LACTB2Q53H82 288 aaPredicted RBP12.73□□□□□ -0.37
USHBP1-201ENST00000252597 OLFML3Q9NRN5 406 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 MAP3K6O95382 1288 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 TTC4O95801 387 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 PAEPP09466 180 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 MXRA7P84157 204 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 STRN3Q13033 797 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 PKN2Q16513 984 aaKnown RBP12.73□□□□□ -0.37
USHBP1-201ENST00000252597 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 DCUN1D2Q6PH85 259 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 TMEM270Q6UE05 265 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 VSTM1Q6UX27 236 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 BZW1Q7L1Q6 419 aaKnown RBP12.73□□□□□ -0.37
USHBP1-201ENST00000252597 TTC8Q8TAM2 541 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 CRAMP1Q96RY5 1269 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 SMC6Q96SB8 1091 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 PAGR1Q9BTK6 254 aa12.73□□□□□ -0.37
USHBP1-201ENST00000252597 CFAP73A6NFT4 308 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 C2orf71A6NGG8 1288 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 POLRMTO00411 1230 aaKnown RBP12.72□□□□□ -0.37
USHBP1-201ENST00000252597 GHRP10912 638 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 ALDH3A1P30838 453 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 RCN2Q14257 317 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 SMTNL2Q2TAL5 461 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 TMEM179Q6ZVK1 233 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 ECHDC2Q86YB7 292 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 PLEKHO2Q8TD55 490 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 DCAF4Q8WV16 495 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 ZNF570Q96NI8 536 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 GLIS2Q9BZE0 524 aaPredicted RBP12.72□□□□□ -0.37
USHBP1-201ENST00000252597 COA1Q9GZY4 146 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 GGA2Q9UJY4 613 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 AGTPBP1Q9UPW5 1226 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 ATXN2Q99700 1313 aaKnown RBP12.72□□□□□ -0.37
USHBP1-201ENST00000252597 LRRD1A4D1F6 860 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 HSPA6P17066 643 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 FOXN2P32314 431 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 ARSEP51690 589 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 FMO1Q01740 532 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 BBS9Q3SYG4 887 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 WLSQ5T9L3 541 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 VPS52Q8N1B4 723 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 GLIS1Q8NBF1 620 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 CYTH2Q99418 400 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 TRABDQ9H4I3 376 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 TMOD2Q9NZR1 351 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 NKX1-2Q9UD57 310 aaPredicted RBP12.72□□□□□ -0.37
USHBP1-201ENST00000252597 PHTF1Q9UMS5 762 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 DIS3Q9Y2L1 958 aaKnown RBP12.72□□□□□ -0.37
USHBP1-201ENST00000252597 PCDHB4Q9Y5E5 795 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 GAKO14976 1311 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 F5H423 210 aaPredicted RBP12.72□□□□□ -0.37
USHBP1-201ENST00000252597 SMIM24O75264 130 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 KITP10721 976 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 GBP1P32455 592 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 PIK3CAP42336 1068 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 MAGEA4P43358 317 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 ISLR2Q6UXK2 745 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 SCARA5Q6ZMJ2 495 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 CTAGE3PQ8IX95 158 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 ANKRD35Q8N283 1001 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 C1orf131Q8NDD1 294 aaKnown RBP12.72□□□□□ -0.37
USHBP1-201ENST00000252597 IL31RAQ8NI17 732 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 TTC17Q96AE7 1141 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 MCUR1Q96AQ8 359 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 FHDC1Q9C0D6 1143 aaPredicted RBP12.72□□□□□ -0.37
USHBP1-201ENST00000252597 ZWILCHQ9H900 591 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 C1orf112Q9NSG2 853 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 ZHX2Q9Y6X8 837 aa12.72□□□□□ -0.37
USHBP1-201ENST00000252597 A0A1B0GUL6 1792 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 A0A1W2PPM1 405 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 NCANO14594 1321 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 RAD17O75943 681 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 CFHP08603 1231 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 PDIA2Q13087 525 aaKnown RBP12.71□□□□□ -0.37
USHBP1-201ENST00000252597 THEMIS2Q5TEJ8 643 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 EMC10Q5UCC4 262 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 SIAH1Q8IUQ4 282 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 CDAN1Q8IWY9 1227 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 EIF1ADQ8N9N8 165 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms