RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 ASB16Q96NS5 453 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
RFPL3-201ENST00000249007 APC2O95996 2303 aa13.32□□□□□ -0.28
RFPL3-201ENST00000249007 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
RFPL3-201ENST00000249007 TSPAN1O60635 241 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 KIF4AO95239 1232 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 PTPN2P17706 415 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 AKAP5P24588 427 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 AXLP30530 894 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 MLLT6P55198 1093 aaPredicted RBP13.31□□□□□ -0.28
RFPL3-201ENST00000249007 NCBP1Q09161 790 aaKnown RBP13.31□□□□□ -0.28
RFPL3-201ENST00000249007 LAMTOR4Q0VGL1 99 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 FUT2Q10981 343 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 DGKKQ5KSL6 1271 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 SYNE3Q6ZMZ3 975 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 RNF149Q8NC42 400 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 DEPDC1BQ8WUY9 529 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 SLC5A5Q92911 643 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 SMARCD2Q92925 531 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 GJA10Q969M2 543 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 TMEM143Q96AN5 459 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 MSANTD3Q96H12 275 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 CPB2Q96IY4 423 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 LRRC2Q9BYS8 371 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 CSRNP2Q9H175 543 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 KALRNO60229 2985 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 VWA8A3KMH1 1905 aa13.31□□□□□ -0.28
RFPL3-201ENST00000249007 ASCC3Q8N3C0 2202 aaKnown RBP13.3□□□□□ -0.28
RFPL3-201ENST00000249007 CASTOR2A6NHX0 329 aa13.3□□□□□ -0.28
RFPL3-201ENST00000249007 ADAMTS3O15072 1205 aa13.3□□□□□ -0.28
RFPL3-201ENST00000249007 CEACAM1P13688 526 aa13.3□□□□□ -0.28
RFPL3-201ENST00000249007 TERF1P54274 439 aa13.3□□□□□ -0.28
RFPL3-201ENST00000249007 ELAVL2Q12926 359 aaKnown RBP13.3□□□□□ -0.28
RFPL3-201ENST00000249007 TUSC3Q13454 348 aa13.3□□□□□ -0.28
RFPL3-201ENST00000249007 PCBP1Q15365 356 aaKnown RBP eCLIP13.3□□□□□ -0.28
RFPL3-201ENST00000249007 PRSS36Q5K4E3 855 aa13.3□□□□□ -0.28
RFPL3-201ENST00000249007 SMC5Q8IY18 1101 aa13.3□□□□□ -0.28
RFPL3-201ENST00000249007 CSGALNACT1Q8TDX6 532 aa13.3□□□□□ -0.28
RFPL3-201ENST00000249007 TCEAL4Q96EI5 215 aa13.3□□□□□ -0.28
RFPL3-201ENST00000249007 CORO1BQ9BR76 489 aa13.3□□□□□ -0.28
RFPL3-201ENST00000249007 KLK14Q9P0G3 267 aa13.3□□□□□ -0.28
RFPL3-201ENST00000249007 ESYT2A0FGR8 921 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 WDR27A2RRH5 827 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 SLC38A8A6NNN8 435 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 ARNTLO00327 626 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 ZNF197O14709 1029 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 LRG1P02750 347 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 VIPR2P41587 438 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 PXNP49023 591 aaPredicted RBP13.29□□□□□ -0.28
RFPL3-201ENST00000249007 KPNA1P52294 538 aaPredicted RBP13.29□□□□□ -0.28
RFPL3-201ENST00000249007 NPEPPSP55786 919 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 RTN1Q16799 776 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 WDR44Q5JSH3 913 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 KIAA1211LQ6NV74 962 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 APOA5Q6Q788 366 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 SGMS1Q86VZ5 419 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 BACH2Q9BYV9 841 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 ZMYND12Q9H0C1 365 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 C6orf50Q9HD87 102 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 NEUROG3Q9Y4Z2 214 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 RBM8AQ9Y5S9 174 aaKnown RBP13.29□□□□□ -0.28
RFPL3-201ENST00000249007 CDY1Q9Y6F8 540 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 ADAMTS20P59510 1910 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 PCNX2A6NKB5 2137 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 PDCD11Q14690 1871 aaKnown RBP13.29□□□□□ -0.28
RFPL3-201ENST00000249007 ZMYM2Q9UBW7 1377 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 CCDC163A0A0D9SF12 145 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 PSMD10O75832 226 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 MICAL2O94851 1124 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 CSRP1P21291 193 aaKnown RBP13.29□□□□□ -0.28
RFPL3-201ENST00000249007 SOX9P48436 509 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 NUCB1Q02818 461 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.29□□□□□ -0.28
RFPL3-201ENST00000249007 EXOC8Q8IYI6 725 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 FAM200AQ8TCP9 573 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 ZC3H10Q96K80 434 aaKnown RBP13.29□□□□□ -0.28
RFPL3-201ENST00000249007 ZSWIM3Q96MP5 696 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 DHX33Q9H6R0 707 aaKnown RBP13.29□□□□□ -0.28
RFPL3-201ENST00000249007 C8orf33Q9H7E9 229 aaPredicted RBP13.29□□□□□ -0.28
RFPL3-201ENST00000249007 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
RFPL3-201ENST00000249007 MTRRQ9UBK8 725 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 PARP2Q9UGN5 583 aa13.29□□□□□ -0.28
RFPL3-201ENST00000249007 MYO18BQ8IUG5 2567 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 LNP1A1A4G5 178 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 ARHGEF37A1IGU5 675 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 INO80B-WBP1J3KQ70 363 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 PRRG1O14668 218 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 ASAP2O43150 1006 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 HYAL3O43820 417 aaPredicted RBP13.28□□□□□ -0.28
RFPL3-201ENST00000249007 EXTL3O43909 919 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 AKAP3O75969 853 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 CCR2P41597 374 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 PSMC5P62195 406 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 SPIRE1Q08AE8 756 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 PFKFB3Q16875 520 aaPredicted RBP13.28□□□□□ -0.28
RFPL3-201ENST00000249007 TXNDC11Q6PKC3 985 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 PDZD4Q76G19 769 aaPredicted RBP13.28□□□□□ -0.28
RFPL3-201ENST00000249007 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 MFSD6LQ8IWD5 586 aa13.28□□□□□ -0.28
RFPL3-201ENST00000249007 CEP170P1Q96L14 293 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms