RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PLIN5Q00G26 463 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 KLHL38Q2WGJ6 581 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 TEDDM1Q5T9Z0 273 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 PI16Q6UXB8 463 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 IFNEQ86WN2 208 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 PARVAQ9NVD7 372 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 CHI3L1P36222 383 aaPredicted RBP13.89□□□□□ -0.19
NEK9-201ENST00000238616 MAPK9P45984 424 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 TRIM71Q2Q1W2 868 aaKnown RBP13.89□□□□□ -0.19
NEK9-201ENST00000238616 USP44Q9H0E7 712 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 MTMR6Q9Y217 621 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 CASZ1Q86V15 1759 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 RGS5O15539 181 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 ACADMP11310 421 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 ENO3P13929 434 aaPredicted RBP13.89□□□□□ -0.19
NEK9-201ENST00000238616 RGS7P49802 495 aa13.89□□□□□ -0.19
NEK9-201ENST00000238616 EIF3EP60228 445 aaKnown RBP13.89□□□□□ -0.19
NEK9-201ENST00000238616 USP17L10C9JJH3 530 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 ASAP2O43150 1006 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 SKAP2O75563 359 aaPredicted RBP13.88□□□□□ -0.19
NEK9-201ENST00000238616 XXYLT1Q8NBI6 393 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 L3MBTL3Q96JM7 780 aaPredicted RBP13.88□□□□□ -0.19
NEK9-201ENST00000238616 CHL1O00533 1208 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 ERVK-10P10266 1014 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 MASTLQ96GX5 879 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 MTIF3Q9H2K0 278 aaKnown RBP13.88□□□□□ -0.19
NEK9-201ENST00000238616 NFIBO00712 420 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 TP53BP2Q13625 1128 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 UBE3CQ15386 1083 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 DPF3Q92784 378 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.88□□□□□ -0.19
NEK9-201ENST00000238616 FAM47E-STBD1D6RA91 191 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 GYS2P54840 703 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 C1orf54Q8WWF1 131 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 MTERF3Q96E29 417 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 LXNQ9BS40 222 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 FAM167BQ9BTA0 163 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 PKD2L2Q9NZM6 624 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 NMT2O60551 498 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 NPHS2Q9NP85 383 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 ZBTB1Q9Y2K1 713 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 KIAA0232Q92628 1395 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 RNF103O00237 685 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 LMBRD2Q68DH5 695 aaPredicted RBP13.88□□□□□ -0.19
NEK9-201ENST00000238616 CCDC81Q6ZN84 652 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 EXD1Q8NHP7 514 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 RIN3Q8TB24 985 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 TTLL13PA6NNM8 815 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 SLC39A14Q15043 492 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 RNF149Q8NC42 400 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 C2orf40Q9H1Z8 148 aa13.88□□□□□ -0.19
NEK9-201ENST00000238616 ZC3H7BQ9UGR2 993 aaKnown RBP13.88□□□□□ -0.19
NEK9-201ENST00000238616 POTECB2RU33 542 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 ANKRD65E5RJM6 399 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 LRG1P02750 347 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 GSTM1P09488 218 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 KCNH2Q12809 1159 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 TM6SF1Q9BZW5 370 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.87□□□□□ -0.19
NEK9-201ENST00000238616 MYO1CO00159 1063 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 CASP1P29466 404 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 HARS2P49590 506 aaKnown RBP13.87□□□□□ -0.19
NEK9-201ENST00000238616 KLHL24Q6TFL4 600 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 SYNE4Q8N205 404 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 AIFM3Q96NN9 605 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
NEK9-201ENST00000238616 MRPL1Q9BYD6 325 aaKnown RBP13.87□□□□□ -0.19
NEK9-201ENST00000238616 YIPF3Q9GZM5 350 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 KLF15Q9UIH9 416 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 NFICP08651 508 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 FGFR4P22455 802 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 SLC24A3Q9HC58 644 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 MARCOQ9UEW3 520 aaPredicted RBP13.87□□□□□ -0.19
NEK9-201ENST00000238616 ITIH6Q6UXX5 1313 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 GUCY1A3Q02108 690 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 NCAPHQ15003 741 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 ZNF438Q7Z4V0 828 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 SLC30A5Q8TAD4 765 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 SH2D3AQ9BRG2 576 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 N6AMT1Q9Y5N5 214 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 TRIM49BA6NDI0 452 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 PGK2P07205 417 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 PYGMP11217 842 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 GALNT4Q8N4A0 578 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 LRRC71Q8N4P6 559 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 REXO4Q9GZR2 422 aaKnown RBP13.87□□□□□ -0.19
NEK9-201ENST00000238616 ANTXR1Q9H6X2 564 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 ARHGEF38Q9NXL2 777 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 PHLPP2Q6ZVD8 1323 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 MYH2Q9UKX2 1941 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 BRAFP15056 766 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 FEN1P39748 380 aaKnown RBP13.87□□□□□ -0.19
NEK9-201ENST00000238616 PROSER3Q2NL68 480 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 NSUN6Q8TEA1 469 aaKnown RBP13.87□□□□□ -0.19
NEK9-201ENST00000238616 LSG1Q9H089 658 aaKnown RBP13.87□□□□□ -0.19
NEK9-201ENST00000238616 ELP3Q9H9T3 547 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 KIAA1586Q9HCI6 787 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 JPH1Q9HDC5 661 aaPredicted RBP13.87□□□□□ -0.19
NEK9-201ENST00000238616 MCM8Q9UJA3 840 aa13.87□□□□□ -0.19
NEK9-201ENST00000238616 SLC39A10Q9ULF5 831 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms