RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 TNFSF9P41273 254 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 WDR72Q3MJ13 1102 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 SCARA5Q6ZMJ2 495 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 ECHDC2Q86YB7 292 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 DHX38Q92620 1227 aaKnown RBP12□□□□□ -0.49
TNFAIP3-201ENST00000237289 WNT8BQ93098 351 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 IQCDQ96DY2 449 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 MTMR12Q9C0I1 747 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 CASTOR2A6NHX0 329 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 PNPLA4P41247 253 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 FMO5P49326 533 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 HIC1Q14526 733 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 PSMD6Q15008 389 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 SGSM1Q2NKQ1 1148 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 NPAS4Q8IUM7 802 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 FIBCD1Q8N539 461 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 OR6B3Q8NGW1 331 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 KIAA0355O15063 1070 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 POLR2BP30876 1174 aaKnown RBP11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 EHHADHQ08426 723 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 SV2CQ496J9 727 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 CEP89Q96ST8 783 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 POP1Q99575 1024 aaKnown RBP11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 DUSP9Q99956 384 aaKnown RBP11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 UBE2TQ9NPD8 197 aaPredicted RBP11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 SNX9Q9Y5X1 595 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 CARNS1A5YM72 827 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 COL6A1P12109 1028 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 TAF6P49848 677 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 NAP1L1P55209 391 aaKnown RBP11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 ARPP19P56211 112 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 POLR2FP61218 127 aaKnown RBP11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 FAM26DQ5JW98 314 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 JADE1Q6IE81 842 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 GAS2L3Q86XJ1 694 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 RNF19AQ9NV58 838 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 TBX21Q9UL17 535 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 PCDHB4Q9Y5E5 795 aa11.99□□□□□ -0.49
TNFAIP3-201ENST00000237289 ENPP3O14638 875 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 ATP2A2P16615 1042 aaKnown RBP11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 IQCB1Q15051 598 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 LINC01465Q8N7H1 131 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 TMEM117Q9H0C3 514 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 SYNCQ9H7C4 482 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 INTS13Q9NVM9 706 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 LGALS16A8MUM7 142 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 PPP1R37O75864 691 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 CD58P19256 250 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 GTF2H1P32780 548 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 GSDMDP57764 484 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 TRAPPC11Q7Z392 1133 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 PARD3BQ8TEW8 1205 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 RAB20Q9NX57 234 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 MAPK13O15264 365 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 BAIAP3O94812 1187 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 HLA-DRAP01903 254 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 SPECC1LQ69YQ0 1117 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 EP400NLQ6ZTU2 488 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 LRRC43Q8N309 656 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 HPDLQ96IR7 371 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 MED10Q9BTT4 135 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 CCDC113Q9H0I3 377 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 RGS18Q9NS28 235 aa11.98□□□□□ -0.49
TNFAIP3-201ENST00000237289 GRIK3Q13003 919 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 CNGA4Q8IV77 575 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 LIMA1Q9UHB6 759 aaKnown RBP11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 P4HA2O15460 535 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 ZNF75DP51815 510 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 CCDC173Q0VFZ6 552 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 PLEKHG4Q58EX7 1191 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 FOXR2Q6PJQ5 311 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 RRAGAQ7L523 313 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 TAS1R3Q7RTX0 852 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 TSPAN18Q96SJ8 248 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 NUCKS1Q9H1E3 243 aaKnown RBP11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 ITGA11Q9UKX5 1188 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 MGAMO43451 1857 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 AKR1B10O60218 316 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 NBNO60934 754 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 FGFR1P11362 822 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 DESP17661 470 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 TBXAS1P24557 533 aaPredicted RBP11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 STAT1P42224 750 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 SPA17Q15506 151 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 TXLNBQ8N3L3 684 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 APPL2Q8NEU8 664 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 CPSF3Q9UKF6 684 aaKnown RBP11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 C2CD2Q9Y426 696 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 ADSSP30520 456 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 ELAVL2Q12926 359 aaKnown RBP11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 NFIL3Q16649 462 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 SV2AQ7L0J3 742 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 TTC39CQ8N584 583 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 MSANTD4Q8NCY6 345 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 PPP2R3CQ969Q6 453 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 ZFP42Q96MM3 310 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 ZNF558Q96NG5 402 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 FIZ1Q96SL8 496 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 FUCA2Q9BTY2 467 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms