RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 TOMM70O94826 608 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 PDE6CP51160 858 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 GPC3P51654 580 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 PPP1R7Q15435 360 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 UGCGQ16739 394 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 TKFCQ3LXA3 575 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 CCDC38Q502W7 563 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 KRT39Q6A163 491 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 EXOC3L1Q86VI1 746 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 IWS1Q96ST2 819 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 ROPN1BQ9BZX4 212 aaPredicted RBP16.61■□□□□ 0.25
CTSD-201ENST00000236671 ROPN1Q9HAT0 212 aaPredicted RBP16.61■□□□□ 0.25
CTSD-201ENST00000236671 WHRNQ9P202 907 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 CCPG1Q9ULG6 757 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 SLC12A4Q9UP95 1085 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 NFIBO00712 420 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 FSCN2O14926 492 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 ICAM1P05362 532 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 KRT17Q04695 432 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 CALCOCO2Q13137 446 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 RHBDF2Q6PJF5 856 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 TAOK1Q7L7X3 1001 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 APOBEC3FQ8IUX4 373 aaKnown RBP16.6■□□□□ 0.25
CTSD-201ENST00000236671 CCDC127Q96BQ5 260 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 SAAL1Q96ER3 474 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 TMEM8AQ9HCN3 771 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 TPX2Q9ULW0 747 aaKnown RBP16.6■□□□□ 0.25
CTSD-201ENST00000236671 UBIAD1Q9Y5Z9 338 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 TRPM7Q96QT4 1865 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 GSTA1P08263 222 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 CAP2P40123 477 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 IFNAR2P48551 515 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 MRPS9P82933 396 aaKnown RBP16.6■□□□□ 0.25
CTSD-201ENST00000236671 MKRN4PQ13434 485 aaPredicted RBP16.6■□□□□ 0.25
CTSD-201ENST00000236671 SGO2Q562F6 1265 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 CST9Q5W186 159 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 ACAD10Q6JQN1 1059 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 TAS1R2Q8TE23 839 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 PARD3BQ8TEW8 1205 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 FAM151AQ8WW52 585 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 C1orf54Q8WWF1 131 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 CLEC4DQ8WXI8 215 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 DHX38Q92620 1227 aaKnown RBP16.6■□□□□ 0.25
CTSD-201ENST00000236671 ELAC2Q9BQ52 826 aaKnown RBP16.6■□□□□ 0.25
CTSD-201ENST00000236671 TIPINQ9BVW5 301 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 GEMIN8Q9NWZ8 242 aaKnown RBP16.6■□□□□ 0.25
CTSD-201ENST00000236671 SAMD15Q9P1V8 674 aa16.6■□□□□ 0.25
CTSD-201ENST00000236671 OTOFQ9HC10 1997 aa16.59■□□□□ 0.25
CTSD-201ENST00000236671 VIMP08670 466 aaKnown RBP16.59■□□□□ 0.25
CTSD-201ENST00000236671 SF3A3Q12874 501 aaKnown RBP eCLIP16.59■□□□□ 0.255e-6■■■■■ 39.5
CTSD-201ENST00000236671 LLGL1Q15334 1064 aa16.59■□□□□ 0.25
CTSD-201ENST00000236671 LONRF1Q17RB8 773 aa16.59■□□□□ 0.25
CTSD-201ENST00000236671 PREPLQ4J6C6 727 aaPredicted RBP16.59■□□□□ 0.25
CTSD-201ENST00000236671 CCDC50Q8IVM0 306 aa16.59■□□□□ 0.25
CTSD-201ENST00000236671 CCDC113Q9H0I3 377 aa16.59■□□□□ 0.25
CTSD-201ENST00000236671 TOPORSQ9NS56 1045 aaPredicted RBP16.59■□□□□ 0.25
CTSD-201ENST00000236671 TBX20Q9UMR3 447 aa16.59■□□□□ 0.25
CTSD-201ENST00000236671 MGRN1O60291 552 aa16.58■□□□□ 0.25
CTSD-201ENST00000236671 OAS1P00973 400 aaKnown RBP16.58■□□□□ 0.25
CTSD-201ENST00000236671 CHKAP35790 457 aa16.58■□□□□ 0.25
CTSD-201ENST00000236671 MTMR1Q13613 665 aa16.58■□□□□ 0.25
CTSD-201ENST00000236671 CLEC16AQ2KHT3 1053 aa16.58■□□□□ 0.25
CTSD-201ENST00000236671 PCNX4Q63HM2 1172 aa16.58■□□□□ 0.25
CTSD-201ENST00000236671 MAP4K3Q8IVH8 894 aa16.58■□□□□ 0.25
CTSD-201ENST00000236671 TMEM161BQ8NDZ6 487 aa16.58■□□□□ 0.25
CTSD-201ENST00000236671 NT5C1BQ96P26 610 aa16.58■□□□□ 0.25
CTSD-201ENST00000236671 MYCBPQ99417 103 aaPredicted RBP16.58■□□□□ 0.25
CTSD-201ENST00000236671 KIFC3Q9BVG8 833 aa16.58■□□□□ 0.25
CTSD-201ENST00000236671 NSRP1Q9H0G5 558 aaKnown RBP16.58■□□□□ 0.25
CTSD-201ENST00000236671 CELF2O95319 508 aaKnown RBP16.58■□□□□ 0.24
CTSD-201ENST00000236671 ACSL3O95573 720 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 IVDP26440 423 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 RDXP35241 583 aaKnown RBP16.58■□□□□ 0.24
CTSD-201ENST00000236671 IRX3P78415 501 aaPredicted RBP16.58■□□□□ 0.24
CTSD-201ENST00000236671 GHRHRQ02643 423 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 SNX1Q13596 522 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 FAM102BQ5T8I3 360 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 WLSQ5T9L3 541 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 C4orf19Q8IY42 314 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 SLC17A8Q8NDX2 589 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 FBXL13Q8NEE6 735 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 MAGEC3Q8TD91 643 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 KIFAP3Q92845 792 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 ELMO3Q96BJ8 720 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 SERPINB12Q96P63 405 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 HERPUD2Q9BSE4 406 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 CHST7Q9NS84 486 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 RAB20Q9NX57 234 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 EXOC7Q9UPT5 735 aa16.58■□□□□ 0.24
CTSD-201ENST00000236671 CNGA1P29973 690 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 MAP2K2P36507 400 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 ELF3P78545 371 aaPredicted RBP16.57■□□□□ 0.24
CTSD-201ENST00000236671 TNFAIP1Q13829 316 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 PLA2G4FQ68DD2 849 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 OTUD6AQ7L8S5 288 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 TRPM8Q7Z2W7 1104 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 FAM83AQ86UY5 434 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 ATG4AQ8WYN0 398 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 PLVAPQ9BX97 442 aa16.57■□□□□ 0.24
CTSD-201ENST00000236671 TRIM7Q9C029 511 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms