RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 ENPEPQ07075 957 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 ITIH4Q14624 930 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 MCOLN2Q8IZK6 566 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 GPD1LQ8N335 351 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 RDM1Q8NG50 284 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 PI4K2AQ9BTU6 479 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 KIAA1683Q9H0B3 1180 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 C17orf75Q9HAS0 396 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 A1CFQ9NQ94 594 aaKnown RBP17.38■□□□□ 0.37
LTBR-201ENST00000228918 CHST7Q9NS84 486 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 DONSONQ9NYP3 566 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 CEP83Q9Y592 693 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 ZC3H11AO75152 810 aaKnown RBP eCLIP17.38■□□□□ 0.377e-6■■□□□ 13.7
LTBR-201ENST00000228918 SNX1Q13596 522 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 PTK6Q13882 451 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 CNGA2Q16280 664 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 ZBED3Q96IU2 234 aaPredicted RBP17.38■□□□□ 0.37
LTBR-201ENST00000228918 HERPUD2Q9BSE4 406 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 MOV10L1Q9BXT6 1211 aaKnown RBP17.38■□□□□ 0.37
LTBR-201ENST00000228918 TRIM7Q9C029 511 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 ASIC3Q9UHC3 531 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 MYPNQ86TC9 1320 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 KIAA1217Q5T5P2 1943 aa17.38■□□□□ 0.37
LTBR-201ENST00000228918 CCT8L1PA6NM43 557 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 ITIH2P19823 946 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 MAN1A1P33908 653 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 MKRN4PQ13434 485 aaPredicted RBP17.37■□□□□ 0.37
LTBR-201ENST00000228918 CCDC38Q502W7 563 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 C15orf39Q6ZRI6 1047 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 SYDE1Q6ZW31 735 aaPredicted RBP17.37■□□□□ 0.37
LTBR-201ENST00000228918 EXOC3L1Q86VI1 746 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 TAX1BP1Q86VP1 789 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 ANKS4BQ8N8V4 417 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 MAIP1Q8WWC4 291 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 SNF8Q96H20 258 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 MTFR1LQ9H019 292 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
LTBR-201ENST00000228918 PARP14Q460N5 1801 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 HNRNPDLO14979 420 aaKnown RBP17.37■□□□□ 0.37
LTBR-201ENST00000228918 ZNF862O60290 1169 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 DNAJC8O75937 253 aaPredicted RBP17.37■□□□□ 0.37
LTBR-201ENST00000228918 GARTP22102 1010 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 SCP2P22307 547 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 IVDP26440 423 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 CHKAP35790 457 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 LONRF1Q17RB8 773 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 ARHGEF16Q5VV41 709 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 FUKQ8N0W3 1084 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 ATG4AQ8WYN0 398 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 FAM84AQ96KN4 292 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 CEP170P1Q96L14 293 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 FAM81BQ96LP2 452 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 SENP7Q9BQF6 1050 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 CCDC113Q9H0I3 377 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 C1orf112Q9NSG2 853 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 HAUS2Q9NVX0 235 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 PCDHA10Q9Y5I2 948 aa17.37■□□□□ 0.37
LTBR-201ENST00000228918 ATP2C2O75185 946 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 STBD1O95210 358 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 ACSL3O95573 720 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 MYBL1P10243 752 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 RRM1P23921 792 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 SLC1A1P43005 524 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 XRCC4Q13426 336 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 CYB5D1Q6P9G0 228 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 OTUD6AQ7L8S5 288 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 ZNF677Q86XU0 584 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 DDX27Q96GQ7 796 aaKnown RBP17.36■□□□□ 0.37
LTBR-201ENST00000228918 SERPINB12Q96P63 405 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 DCLK3Q9C098 648 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 WNT10BO00744 389 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 NBPF9Q3BBW0 867 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 BRDTQ58F21 947 aaPredicted RBP17.36■□□□□ 0.37
LTBR-201ENST00000228918 TAS1R3Q7RTX0 852 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 NLRX1Q86UT6 975 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 RTKN2Q8IZC4 609 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 AGBL3Q8NEM8 1001 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 GRK7Q8WTQ7 553 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 TRIM11Q96F44 468 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 SGSM3Q96HU1 749 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 FAM213AQ9BRX8 229 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 SAMD15Q9P1V8 674 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 GABBR1Q9UBS5 961 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 DOCK5Q9H7D0 1870 aa17.36■□□□□ 0.37
LTBR-201ENST00000228918 KIF1CO43896 1103 aaKnown RBP17.35■□□□□ 0.37
LTBR-201ENST00000228918 IFNAR2P48551 515 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 CENPCQ03188 943 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 CPA5Q8WXQ8 436 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 ZNF516Q92618 1163 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 NSRP1Q9H0G5 558 aaKnown RBP17.35■□□□□ 0.37
LTBR-201ENST00000228918 XPNPEP1Q9NQW7 623 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 HOMER3Q9NSC5 361 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 PCDHB2Q9Y5E7 798 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 CHUKO15111 745 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 GAS8O95995 478 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 CYP1A1P04798 512 aaPredicted RBP17.35■□□□□ 0.37
LTBR-201ENST00000228918 VIMP08670 466 aaKnown RBP17.35■□□□□ 0.37
LTBR-201ENST00000228918 ITGA8P53708 1063 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 RTP1P59025 263 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 PTP4A2Q12974 167 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms