RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 ZNF658Q5TYW1 1059 aaPredicted RBP15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 JADE1Q6IE81 842 aa15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 CD300LGQ6UXG3 332 aa15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 CBWD2Q8IUF1 395 aa15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 MICALL1Q8N3F8 863 aa15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 RDH13Q8NBN7 331 aa15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 PPM1EQ8WY54 764 aa15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 TUBGCP4Q9UGJ1 667 aa15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 REV3LO60673 3130 aa15.66■□□□□ 0.1
SUPT4H1-201ENST00000225504 EFEMP2O95967 443 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 PPM1AP35813 382 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 CLCNKBP51801 687 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 KRT17Q04695 432 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 PPP2R3AQ06190 1150 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 SCARA3Q6AZY7 606 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 HS2ST1Q7LGA3 356 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 GPD1LQ8N335 351 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 GUF1Q8N442 669 aaKnown RBP15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 HASPINQ8TF76 798 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 KIF12Q96FN5 646 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 COLEC11Q9BWP8 271 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 GPR62Q9BZJ7 368 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 CLSTN2Q9H4D0 955 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 DMAC2Q9NW81 257 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 RMND1Q9NWS8 449 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 STXBP5LQ9Y2K9 1186 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 ANK1P16157 1881 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 ATG2AQ2TAZ0 1938 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 PDXKO00764 312 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 KIF4AO95239 1232 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 LDHAP00338 332 aaKnown RBP15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 NFICP08651 508 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 CD44P16070 742 aaKnown RBP15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 HSP90AA2PQ14568 343 aaPredicted RBP15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 UPP1Q16831 310 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 DDX53Q86TM3 631 aaKnown RBP15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 C3orf58Q8NDZ4 430 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 AUTS2Q8WXX7 1259 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 TMEM169Q96HH4 297 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 FBXL18Q96ME1 805 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 PDE11AQ9HCR9 933 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 LMCD1Q9NZU5 365 aa15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 PUF60Q9UHX1 559 aaKnown RBP15.65■□□□□ 0.1
SUPT4H1-201ENST00000225504 PDCD11Q14690 1871 aaKnown RBP15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 FSCN2O14926 492 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 SNRPFP62306 86 aaKnown RBP15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 UBE3AQ05086 875 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 MORC3Q14149 939 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 PTPROQ16827 1216 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 DCLRE1AQ6PJP8 1040 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 ADGRD2Q7Z7M1 963 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 BRSK2Q8IWQ3 736 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 C12orf56Q8IXR9 622 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 EFCAB13Q8IY85 973 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 VPS52Q8N1B4 723 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 MICAL1Q8TDZ2 1067 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 B3GALT6Q96L58 329 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 LMAN2LQ9H0V9 348 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 RBAKQ9NYW8 714 aaPredicted RBP15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 KIAA1468Q9P260 1216 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 TRAF3IP3Q9Y228 551 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 LZTS1Q9Y250 596 aa15.64■□□□□ 0.09
SUPT4H1-201ENST00000225504 ZNF233A6NK53 670 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 HIDE1A8MVS5 230 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 GOLGA6L22H0YM25 854 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 I3L4J1 428 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 PPEF2O14830 753 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 KIAA0391O15091 583 aaKnown RBP15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 TADA2AO75478 443 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 NR3C1P04150 777 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 MCM4P33991 863 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 GTF2F1P35269 517 aaKnown RBP eCLIP15.63■□□□□ 0.093e-6■■■■□ 22.4
SUPT4H1-201ENST00000225504 CASP4P49662 377 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 PMS1P54277 932 aaKnown RBP15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 POU5F1Q01860 360 aaKnown RBP15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 TCEAL5Q5H9L2 206 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 CD302Q8IX05 232 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 ADSSL1Q8N142 457 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 XXYLT1Q8NBI6 393 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 TCF25Q9BQ70 676 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 ASB7Q9H672 318 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 TLR9Q9NR96 1032 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 SLC38A7Q9NVC3 462 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 CGNQ9P2M7 1197 aaKnown RBP15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 ADAM28Q9UKQ2 775 aa15.63■□□□□ 0.09
SUPT4H1-201ENST00000225504 PTPRJQ12913 1337 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 PPP1R3GB7ZBB8 358 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 PODXLO00592 558 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 EXOC3O60645 756 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 B3GAT3O94766 335 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 CXCL14O95715 111 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 TMEM132DQ14C87 1099 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 SNRNP35Q16560 246 aaKnown RBP15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 ZCWPW2Q504Y3 356 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 SPATA1Q5VX52 437 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 PLPP4Q5VZY2 271 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 ANKRD40Q6AI12 368 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 CENPPQ6IPU0 288 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 TMC7Q7Z402 723 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms