RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 UBQLN1Q9UMX0 589 aaKnown RBP14.28□□□□□ -0.12
TIMP1-201ENST00000218388 INSL6Q9Y581 213 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 SMIM28A0A1B0GU29 152 aa14.27□□□□□ -0.13
TIMP1-201ENST00000218388 TLL1O43897 1013 aa14.27□□□□□ -0.13
TIMP1-201ENST00000218388 TPM2P07951 284 aa14.27□□□□□ -0.13
TIMP1-201ENST00000218388 TMEM191BP0C7N4 346 aa14.27□□□□□ -0.13
TIMP1-201ENST00000218388 CDK11BP21127 795 aaKnown RBP14.27□□□□□ -0.13
TIMP1-201ENST00000218388 EEF1GP26641 437 aaKnown RBP14.27□□□□□ -0.13
TIMP1-201ENST00000218388 MARSP56192 900 aaKnown RBP14.27□□□□□ -0.13
TIMP1-201ENST00000218388 BTG3Q14201 252 aaPredicted RBP14.27□□□□□ -0.13
TIMP1-201ENST00000218388 CHRDL2Q6WN34 429 aa14.27□□□□□ -0.13
TIMP1-201ENST00000218388 DHX40Q8IX18 779 aaKnown RBP14.27□□□□□ -0.13
TIMP1-201ENST00000218388 BEST2Q8NFU1 509 aa14.27□□□□□ -0.13
TIMP1-201ENST00000218388 PARD3BQ8TEW8 1205 aa14.27□□□□□ -0.13
TIMP1-201ENST00000218388 ZNF689Q96CS4 500 aaPredicted RBP14.27□□□□□ -0.13
TIMP1-201ENST00000218388 ANKRD36BP1Q96IX9 119 aa14.27□□□□□ -0.13
TIMP1-201ENST00000218388 CASD1Q96PB1 797 aa14.27□□□□□ -0.13
TIMP1-201ENST00000218388 PDE11AQ9HCR9 933 aa14.27□□□□□ -0.13
TIMP1-201ENST00000218388 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 A0A1W2PPC1 479 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 KCNJ18B7U540 433 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 PTGESO14684 152 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 POMCP01189 267 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 TNNC2P02585 160 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 NFICP08651 508 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 CYP3A5P20815 502 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 MTIF2P46199 727 aaKnown RBP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 HTRA4P83105 476 aaPredicted RBP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 TFAMQ00059 246 aaKnown RBP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 KCNJ12Q14500 433 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 NCAPHQ15003 741 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 IQCB1Q15051 598 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 DUOXA2Q1HG44 320 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 PAN2Q504Q3 1202 aaKnown RBP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 DCAF17Q5H9S7 520 aaPredicted RBP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 GLRA4Q5JXX5 417 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 TCERG1LQ5VWI1 586 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 JADE1Q6IE81 842 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 TMCO2Q7Z6W1 182 aaPredicted RBP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 PPP1R10Q96QC0 940 aaKnown RBP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 RC3H2Q9HBD1 1191 aaKnown RBP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 SAMSN1Q9NSI8 373 aaKnown RBP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 TBC1D13Q9NVG8 400 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 FANCLQ9NW38 375 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 R3HCC1Q9Y3T6 440 aaKnown RBP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.26□□□□□ -0.13
TIMP1-201ENST00000218388 COL4A6Q14031 1691 aa14.26□□□□□ -0.13
TIMP1-201ENST00000218388 MEFVO15553 781 aaPredicted RBP14.25□□□□□ -0.13
TIMP1-201ENST00000218388 N4BP1O75113 896 aaKnown RBP14.25□□□□□ -0.13
TIMP1-201ENST00000218388 PRKCSHP14314 528 aaPredicted RBP14.25□□□□□ -0.13
TIMP1-201ENST00000218388 GTF2H1P32780 548 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 GATMP50440 423 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 TUSC3Q13454 348 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 RAB30Q15771 203 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 TCP11X2Q5H9J9 407 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 SPOUT1Q5T280 376 aaKnown RBP14.25□□□□□ -0.13
TIMP1-201ENST00000218388 PRPF38BQ5VTL8 546 aaKnown RBP14.25□□□□□ -0.13
TIMP1-201ENST00000218388 CDKAL1Q5VV42 579 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 LUZP1Q86V48 1076 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 EFCAB13Q8IY85 973 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 FIBCD1Q8N539 461 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 GSTCDQ8NEC7 633 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 BORCS6Q96GS4 357 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 UROC1Q96N76 676 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 ZMAT2Q96NC0 199 aaKnown RBP14.25□□□□□ -0.13
TIMP1-201ENST00000218388 AAASQ9NRG9 546 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 INTS13Q9NVM9 706 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 PCDHA11Q9Y5I1 949 aa14.25□□□□□ -0.13
TIMP1-201ENST00000218388 LRRIQ3A6PVS8 624 aaPredicted RBP14.24□□□□□ -0.13
TIMP1-201ENST00000218388 LAG3P18627 525 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 MCCD1P59942 119 aaPredicted RBP14.24□□□□□ -0.13
TIMP1-201ENST00000218388 CLDN10P78369 228 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 CETN1Q12798 172 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 MAN2A1Q16706 1144 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 HSP90AA4PQ58FG1 418 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 IRF2BP1Q8IU81 584 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 TRIM59Q8IWR1 403 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 SLC35C1Q96A29 364 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 DDX27Q96GQ7 796 aaKnown RBP14.24□□□□□ -0.13
TIMP1-201ENST00000218388 TMEM175Q9BSA9 504 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 MTMR12Q9C0I1 747 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 PRO3102Q9H379 93 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 MIOSQ9NXC5 875 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 MSRAQ9UJ68 235 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 ITGA11Q9UKX5 1188 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 PLAGL2Q9UPG8 496 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 RWDD3Q9Y3V2 267 aa14.24□□□□□ -0.13
TIMP1-201ENST00000218388 TNRC18O15417 2968 aaPredicted RBP14.24□□□□□ -0.13
TIMP1-201ENST00000218388 GBF1Q92538 1859 aa14.23□□□□□ -0.13
TIMP1-201ENST00000218388 ZC3H11AO75152 810 aaKnown RBP eCLIP14.23□□□□□ -0.13
TIMP1-201ENST00000218388 PHACTR2O75167 634 aa14.23□□□□□ -0.13
TIMP1-201ENST00000218388 AFPP02771 609 aaKnown RBP14.23□□□□□ -0.13
TIMP1-201ENST00000218388 TRIM49P0CI25 452 aa14.23□□□□□ -0.13
TIMP1-201ENST00000218388 TRIM49CP0CI26 452 aa14.23□□□□□ -0.13
TIMP1-201ENST00000218388 ZNF18P17022 549 aa14.23□□□□□ -0.13
TIMP1-201ENST00000218388 RPL9P32969 192 aaKnown RBP14.23□□□□□ -0.13
TIMP1-201ENST00000218388 MXI1P50539 228 aa14.23□□□□□ -0.13
TIMP1-201ENST00000218388 AFF1P51825 1210 aaKnown RBP14.23□□□□□ -0.13
TIMP1-201ENST00000218388 WNT7BP56706 349 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms