RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 KRT39Q6A163 491 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 MAP4K3Q8IVH8 894 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 LRRC57Q8N9N7 239 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 HNRNPLLQ8WVV9 542 aaKnown RBP10.69□□□□□ -0.7
USP11-201ENST00000218348 KIFAP3Q92845 792 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 FAM204AQ9H8W3 233 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 TMEM165Q9HC07 324 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 RAB20Q9NX57 234 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 LYPLA2O95372 231 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 CFHP08603 1231 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 CD58P19256 250 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 GLRA2P23416 452 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 TNFSF9P41273 254 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 STAT5BP51692 787 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 XKR3Q5GH77 459 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 MMGT1Q8N4V1 131 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 USP38Q8NB14 1042 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 CASKIN2Q8WXE0 1202 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 ZNF516Q92618 1163 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 USP6NLQ92738 828 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 RPGRIP1Q96KN7 1286 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 NT5C1BQ96P26 610 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 TRIM51Q9BSJ1 452 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 HAPLN2Q9GZV7 340 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 MAF1Q9H063 256 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 TSPYL2Q9H2G4 693 aaPredicted RBP10.69□□□□□ -0.7
USP11-201ENST00000218348 AGO2Q9UKV8 859 aaKnown RBP10.69□□□□□ -0.7
USP11-201ENST00000218348 ABT1Q9ULW3 272 aaKnown RBP10.69□□□□□ -0.7
USP11-201ENST00000218348 DNAJC25-GNG10A0A024R161 153 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 GOLGA6BA6NDN3 693 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 OATP04181 439 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 FDX1P10109 184 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 CYP24A1Q07973 514 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 NOGQ13253 232 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 SCARA5Q6ZMJ2 495 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 NT5DC3Q86UY8 548 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 RIOX2Q8IUF8 465 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 SLC9A9Q8IVB4 645 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 THNSL1Q8IYQ7 743 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 FBXL13Q8NEE6 735 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 OLIG1Q8TAK6 271 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 EPS8L1Q8TE68 723 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 PRPF31Q8WWY3 499 aaKnown RBP10.69□□□□□ -0.7
USP11-201ENST00000218348 ALG3Q92685 438 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 MIEF2Q96C03 454 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 ZNF653Q96CK0 615 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 FAM118BQ9BPY3 351 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 JPH2Q9BR39 696 aaPredicted RBP10.69□□□□□ -0.7
USP11-201ENST00000218348 MSTO1Q9BUK6 570 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 RNF19AQ9NV58 838 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 UBE4BO95155 1302 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 UMODL1Q5DID0 1318 aa10.69□□□□□ -0.7
USP11-201ENST00000218348 GSTTP1A0A1W2PQM5 241 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 ZNF233A6NK53 670 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 TTI1O43156 1089 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 SART1O43290 800 aaKnown RBP10.68□□□□□ -0.7
USP11-201ENST00000218348 KRT14P02533 472 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 PIK3CAP42336 1068 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 CCNHP51946 323 aaPredicted RBP10.68□□□□□ -0.7
USP11-201ENST00000218348 GPD1LQ8N335 351 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 SH2D3CQ8N5H7 860 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 MCPH1Q8NEM0 835 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 OR2W6PQ8NHA6 318 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 PCYT2Q99447 389 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 PORCNQ9H237 461 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 TRPC6Q9Y210 931 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 SYNGAP1Q96PV0 1343 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 ABCD1P33897 745 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 CRHR2Q13324 411 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 ORC1Q13415 861 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 IFI16Q16666 785 aaKnown RBP10.68□□□□□ -0.7
USP11-201ENST00000218348 ZFYVE27Q5T4F4 411 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 RHPN2Q8IUC4 686 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 REM2Q8IYK8 340 aaPredicted RBP10.68□□□□□ -0.7
USP11-201ENST00000218348 KIRREL3Q8IZU9 778 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 KLHL23Q8NBE8 558 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 OR5B17Q8NGF7 314 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 UHMK1Q8TAS1 419 aaKnown RBP10.68□□□□□ -0.7
USP11-201ENST00000218348 RFFLQ8WZ73 363 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 FAM210AQ96ND0 272 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 MAP3K20Q9NYL2 800 aaKnown RBP10.68□□□□□ -0.7
USP11-201ENST00000218348 ALG6Q9Y672 507 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 MYH9P35579 1960 aaKnown RBP10.68□□□□□ -0.7
USP11-201ENST00000218348 DAPK3O43293 454 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 SPOPO43791 374 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 CHRNB2P17787 502 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 MFAP3P55082 362 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 TSHZ1Q6ZSZ6 1077 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 KCTD17Q8N5Z5 321 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 RNF149Q8NC42 400 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 PPM1EQ8WY54 764 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 CDHR1Q96JP9 859 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 IWS1Q96ST2 819 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 AZI2Q9H6S1 392 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 RBAKQ9NYW8 714 aaPredicted RBP10.68□□□□□ -0.7
USP11-201ENST00000218348 PTPN22Q9Y2R2 807 aa10.68□□□□□ -0.7
USP11-201ENST00000218348 MCM3APO60318 1980 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 INO80B-WBP1J3KQ70 363 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 PGRMC1O00264 195 aaKnown RBP10.67□□□□□ -0.7
USP11-201ENST00000218348 ATP8B1O43520 1251 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms