RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 ZNFX1Q9P2E3 1918 aaKnown RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 ERLIN2O94905 339 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 PRKCBP05771 671 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 PGK2P07205 417 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 FAM153BP0C7A2 387 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 HSPA9P38646 679 aaKnown RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 SLC26A2P50443 739 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 DR1Q01658 176 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 TFDP1Q14186 410 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 MAPK6Q16659 721 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 TMEM132AQ24JP5 1023 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 FAM153CQ494X1 144 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 CELF3Q5SZQ8 465 aaKnown RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 BRSK2Q8IWQ3 736 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 FBXO16Q8IX29 292 aaPredicted RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 DHX37Q8IY37 1157 aaKnown RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 ATP8B4Q8TF62 1192 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 ZC3H15Q8WU90 426 aaKnown RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 GTF3C2Q8WUA4 911 aaPredicted RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 DDX1Q92499 740 aaKnown RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 ZNF516Q92618 1163 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 ALG3Q92685 438 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 ZBTB45Q96K62 511 aaPredicted RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 SPATA33Q96N06 139 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 RUNDC3BQ96NL0 473 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 ZIM3Q96PE6 472 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 GPR20Q99678 358 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 MROH8Q9H579 483 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 CWC15Q9P013 229 aaKnown RBP8.85□□□□□ -0.99
VAMP3-201ENST00000054666 CALCOCO1Q9P1Z2 691 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 FAM153AQ9UHL3 310 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 PRDM4Q9UKN5 801 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 PNMA3Q9UL41 463 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 PCDHB4Q9Y5E5 795 aa8.85□□□□□ -0.99
VAMP3-201ENST00000054666 LOC102724159A0A0B4J2E5 919 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 FAM187AA6NFU0 413 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 PHF2O75151 1096 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 LGR5O75473 907 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 TOM1L1O75674 476 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 CLTAP09496 248 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 CTNNA2P26232 953 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 GNA15P30679 374 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 MAPK4P31152 587 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 CHRNA3P32297 505 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 CTNNA1P35221 906 aaKnown RBP8.84□□□□□ -0.99
VAMP3-201ENST00000054666 RWDD2BP57060 319 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 TTLL4Q14679 1199 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 PWP2Q15269 919 aaKnown RBP8.84□□□□□ -0.99
VAMP3-201ENST00000054666 SURF1Q15526 300 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 LIN9Q5TKA1 542 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 C9orf131Q5VYM1 1079 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 CDCA2Q69YH5 1023 aaPredicted RBP8.84□□□□□ -0.99
VAMP3-201ENST00000054666 CRELD2Q6UXH1 353 aaPredicted RBP8.84□□□□□ -0.99
VAMP3-201ENST00000054666 PLPPR4Q7Z2D5 763 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 ADAT2Q7Z6V5 191 aaKnown RBP8.84□□□□□ -0.99
VAMP3-201ENST00000054666 TRIM50Q86XT4 487 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 RNF149Q8NC42 400 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 PRPF31Q8WWY3 499 aaKnown RBP8.84□□□□□ -0.99
VAMP3-201ENST00000054666 KRT35Q92764 455 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 ELMO3Q96BJ8 720 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 AVENQ9NQS1 362 aaPredicted RBP8.84□□□□□ -0.99
VAMP3-201ENST00000054666 CHORDC1Q9UHD1 332 aaPredicted RBP8.84□□□□□ -0.99
VAMP3-201ENST00000054666 ANAPC7Q9UJX3 599 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 ADGRA2Q96PE1 1338 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 ASB14A6NK59 587 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 DAPK3O43293 454 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 ARIH2O95376 493 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 EPHX2P34913 555 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 ACTN2P35609 894 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 LAMTOR4Q0VGL1 99 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 GRM1Q13255 1194 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 NCOA4Q13772 614 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 HSDL1Q3SXM5 330 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 ZBTB41Q5SVQ8 909 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 SPOPLQ6IQ16 392 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 TMEM270Q6UE05 265 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 MOB2Q70IA6 237 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 WDR49Q8IV35 697 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 FAM84AQ96KN4 292 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 CELF4Q9BZC1 486 aaKnown RBP8.84□□□□□ -0.99
VAMP3-201ENST00000054666 HAPLN2Q9GZV7 340 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 DPH5Q9H2P9 285 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 SMARCAD1Q9H4L7 1026 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 TXNRD2Q9NNW7 524 aa8.84□□□□□ -0.99
VAMP3-201ENST00000054666 PTPRJQ12913 1337 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 DNAJC25-GNG10A0A024R161 153 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 OGTO15294 1046 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 VNN1O95497 513 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 IVLP07476 585 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 SRGAP2CP0DJJ0 459 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 UNGP13051 313 aaPredicted RBP8.83□□□□□ -1
VAMP3-201ENST00000054666 ECHS1P30084 290 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 GBP1P32455 592 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 SLC1A1P43005 524 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 MARCKSL1P49006 195 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 WNT7BP56706 349 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 CENPCQ03188 943 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 DRP2Q13474 957 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 SNAPC2Q13487 334 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 TRADDQ15628 312 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms