RNA–Protein interactions for RNA: ENST00000637589.1

CACNA1D-225, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-225ENST00000637589 SURF1Q15526 300 aa12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 SNRNP35Q16560 246 aaKnown RBP12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 EDRF1Q3B7T1 1238 aa12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 GLRA4Q5JXX5 417 aa12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 C12orf56Q8IXR9 622 aa12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 TMEM192Q8IY95 271 aa12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 CRIPAKQ8N1N5 446 aa12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 ZNF689Q96CS4 500 aaPredicted RBP12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 SNX27Q96L92 541 aa12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 CASD1Q96PB1 797 aa12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 NAT10Q9H0A0 1025 aaKnown RBP12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 NKX2-4Q9H2Z4 354 aa12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 TBC1D13Q9NVG8 400 aa12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 CPSF3Q9UKF6 684 aaKnown RBP12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 PCDHB12Q9Y5F1 795 aa12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.91□□□□□ -0.34
CACNA1D-225ENST00000637589 PPP1R3GB7ZBB8 358 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 CCDC192P0DO97 292 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 KRT13P13646 458 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 LAG3P18627 525 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 BMP6P22004 513 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 STX17P56962 302 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 POU5F1Q01860 360 aaKnown RBP12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 ENOX2Q16206 610 aaKnown RBP12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 SLC10A6Q3KNW5 377 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 ZBTB41Q5SVQ8 909 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 CENPPQ6IPU0 288 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 RBM43Q6ZSC3 357 aaKnown RBP12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 SLC9A9Q8IVB4 645 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 CACTINQ8WUQ7 758 aaKnown RBP12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 KIF12Q96FN5 646 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 TSPAN18Q96SJ8 248 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 SEMA6BQ9H3T3 888 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 ASB7Q9H672 318 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 MTUS1Q9ULD2 1270 aa12.9□□□□□ -0.34
CACNA1D-225ENST00000637589 LAMA3Q16787 3333 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 SMIM28A0A1B0GU29 152 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 LCHNA4D1U4 455 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 LACTBL1A8MY62 500 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 ALDH2P05091 517 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 DLATP10515 647 aaKnown RBP12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 EPB41P11171 864 aaKnown RBP12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 CTNNB1P35222 781 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 PSMC2P35998 433 aaKnown RBP12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 OR1G1P47890 313 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 DPCR1Q3MIW9 517 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 CT47A1Q5JQC4 288 aaPredicted RBP12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 ANKRD40Q6AI12 368 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 CBWD2Q8IUF1 395 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 CREBRFQ8IUR6 639 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 CSGALNACT2Q8N6G5 542 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 CCDC127Q96BQ5 260 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 ZNF558Q96NG5 402 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 SAMD11Q96NU1 681 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 TGS1Q96RS0 853 aaKnown RBP12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 RNF19AQ9NV58 838 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 RWDD2AQ9UIY3 292 aa12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 MRPL42Q9Y6G3 142 aaKnown RBP12.89□□□□□ -0.35
CACNA1D-225ENST00000637589 TTC26A0AVF1 554 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 SYCE3A1L190 88 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 TRIM49BA6NDI0 452 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 CLSTN1O94985 981 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 KCNE1P15382 129 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 TNNI1P19237 187 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 ERCC5P28715 1186 aaPredicted RBP12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 PPM1AP35813 382 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 TFAMQ00059 246 aaKnown RBP12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 TYRO3Q06418 890 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 SPAG1Q07617 926 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 TMEM132DQ14C87 1099 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 NFIL3Q16649 462 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 CCDC40Q4G0X9 1142 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 FAM186BQ8IYM0 893 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 BEST2Q8NFU1 509 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 SP7Q8TDD2 431 aaPredicted RBP12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 EEF2KMTQ96G04 330 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 COLEC11Q9BWP8 271 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 CNTN3Q9P232 1028 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 UBQLN1Q9UMX0 589 aaKnown RBP12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 FAN1Q9Y2M0 1017 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 INPPL1O15357 1258 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 FAM189A1O60320 539 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 TNNC2P02585 160 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 TMEM191BP0C7N4 346 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 AFF1P51825 1210 aaKnown RBP12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 BCAR1P56945 870 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 KRT17Q04695 432 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 TUSC3Q13454 348 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 ZCWPW2Q504Y3 356 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 HABP4Q5JVS0 413 aaKnown RBP12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 ZNF697Q5TEC3 545 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 JADE1Q6IE81 842 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 CRELD2Q6UXH1 353 aaPredicted RBP12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 INTS8Q75QN2 995 aaKnown RBP12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 NT5DC4Q86YG4 428 aa12.88□□□□□ -0.35
CACNA1D-225ENST00000637589 ZNF280BQ86YH2 543 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms