RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 RRAGAQ7L523 313 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 CCDC170Q8IYT3 715 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 SPAG5Q96R06 1193 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 PAK6Q9NQU5 681 aaPredicted RBP16.61■□□□□ 0.25
CLN6-219ENST00000637329 PHF24Q9UPV7 400 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 FHOD1Q9Y613 1164 aa16.61■□□□□ 0.25
CLN6-219ENST00000637329 A0A1W2PQ45 241 aaPredicted RBP16.6■□□□□ 0.25
CLN6-219ENST00000637329 A0A1W2PQY0 241 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 B4GALT4O60513 344 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 ACTN1P12814 892 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 TNNI1P19237 187 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 ANXA13P27216 316 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 TNFSF9P41273 254 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 GRM5P41594 1212 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 MNX1P50219 401 aaPredicted RBP16.6■□□□□ 0.25
CLN6-219ENST00000637329 JAM2P57087 298 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 TMEM62Q0P6H9 643 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 SLC9C1Q4G0N8 1177 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 SFMBT2Q5VUG0 894 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 SV2AQ7L0J3 742 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 SLC43A3Q8NBI5 491 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 PPP1R13LQ8WUF5 828 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 CELF4Q9BZC1 486 aaKnown RBP16.6■□□□□ 0.25
CLN6-219ENST00000637329 SENP6Q9GZR1 1112 aaPredicted RBP16.6■□□□□ 0.25
CLN6-219ENST00000637329 PDE11AQ9HCR9 933 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 NLRC4Q9NPP4 1024 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 TOPORSQ9NS56 1045 aaPredicted RBP16.6■□□□□ 0.25
CLN6-219ENST00000637329 AIPL1Q9NZN9 384 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 GRIN2DO15399 1336 aa16.6■□□□□ 0.25
CLN6-219ENST00000637329 A0A0U1RQG5 324 aaPredicted RBP16.59■□□□□ 0.25
CLN6-219ENST00000637329 SSU72P8A0A1W2PR75 194 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 GOLGA6L9A6NEM1 432 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 SOWAHDA6NJG2 315 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 DNM1LO00429 736 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 ZSCAN12O43309 604 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
CLN6-219ENST00000637329 CYLC1P35663 651 aaPredicted RBP16.59■□□□□ 0.25
CLN6-219ENST00000637329 ENOX2Q16206 610 aaKnown RBP16.59■□□□□ 0.25
CLN6-219ENST00000637329 PTGISQ16647 500 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 E4F1Q66K89 784 aaPredicted RBP16.59■□□□□ 0.25
CLN6-219ENST00000637329 IQCEQ6IPM2 695 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 NT5DC4Q86YG4 428 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 CD302Q8IX05 232 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 SH3TC2Q8TF17 1288 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 DPF3Q92784 378 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 CPB2Q96IY4 423 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 STK33Q9BYT3 514 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 ASB7Q9H672 318 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 RPF1Q9H9Y2 349 aaKnown RBP16.59■□□□□ 0.25
CLN6-219ENST00000637329 RAB20Q9NX57 234 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 GINS2Q9Y248 185 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 SZT2Q5T011 3432 aa16.59■□□□□ 0.25
CLN6-219ENST00000637329 F8VZ95 297 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 CSDE1O75534 798 aaKnown RBP16.58■□□□□ 0.24
CLN6-219ENST00000637329 C4BPAP04003 597 aaKnown RBP16.58■□□□□ 0.24
CLN6-219ENST00000637329 SERPING1P05155 500 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 CCDC175P0C221 793 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 STAG3L1P0CL83 205 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 HOXA11P31270 313 aaPredicted RBP16.58■□□□□ 0.24
CLN6-219ENST00000637329 PRKCIP41743 596 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 PIK3CAP42336 1068 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 MGAT3Q09327 533 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
CLN6-219ENST00000637329 RAPGEF1Q13905 1077 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 ASIC2Q16515 512 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 TDRD10Q5VZ19 366 aaKnown RBP16.58■□□□□ 0.24
CLN6-219ENST00000637329 RAD9BQ6WBX8 426 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 ENOSF1Q7L5Y1 443 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 THNSL1Q8IYQ7 743 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 CCAR2Q8N163 923 aaKnown RBP16.58■□□□□ 0.24
CLN6-219ENST00000637329 TMEM40Q8WWA1 233 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 NT5C1BQ96P26 610 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 CCDC94Q9BW85 323 aaPredicted RBP16.58■□□□□ 0.24
CLN6-219ENST00000637329 UNC93B1Q9H1C4 597 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 CDHR5Q9HBB8 845 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 BZW2Q9Y6E2 419 aaKnown RBP16.58■□□□□ 0.24
CLN6-219ENST00000637329 CDY2AQ9Y6F7 541 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 PTPRJQ12913 1337 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 MROH7Q68CQ1 1323 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 TRIOBPQ9H2D6 2365 aa16.58■□□□□ 0.24
CLN6-219ENST00000637329 NDUFA10O95299 355 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 CCDC172P0C7W6 258 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 FERP16591 822 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 STAT1P42224 750 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 WNT7BP56706 349 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 APBA1Q02410 837 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 GCNT1Q02742 428 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 FAM26DQ5JW98 314 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 CEP120Q8N960 986 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 TAS1R2Q8TE23 839 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 ANKRD36BP1Q96IX9 119 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 TSPAN18Q96SJ8 248 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 POP1Q99575 1024 aaKnown RBP16.57■□□□□ 0.24
CLN6-219ENST00000637329 STARD7Q9NQZ5 370 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 C1orf112Q9NSG2 853 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 DNAJC12Q9UKB3 198 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 PIN4Q9Y237 131 aaKnown RBP16.57■□□□□ 0.24
CLN6-219ENST00000637329 NOD1Q9Y239 953 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 PPP2R2CQ9Y2T4 447 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 DERAQ9Y315 318 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms