RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 DPCR1Q3MIW9 517 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 SEZ6Q53EL9 994 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 KCNT2Q6UVM3 1135 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 LRRC55Q6ZSA7 311 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 HS2ST1Q7LGA3 356 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 CEP120Q8N960 986 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 TRIML1Q8N9V2 468 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 COLGALT1Q8NBJ5 622 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 ZFP42Q96MM3 310 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 ZNF558Q96NG5 402 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 GSDMAQ96QA5 445 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 FGFBP2Q9BYJ0 223 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 GTPBP4Q9BZE4 634 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 CWH43Q9H720 699 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 NRDE2Q9H7Z3 1164 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 PUF60Q9UHX1 559 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 DACH1Q9UI36 760 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 AGO2Q9UKV8 859 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 FAN1Q9Y2M0 1017 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 PCDHA5Q9Y5H7 936 aa10.02□□□□□ -0.81
CACNA1A-239ENST00000637297 ZMYM2Q9UBW7 1377 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 TISP43B9A030 160 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 C5orf67F2Z3F1 127 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 RFXAPO00287 272 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 ABLIM1O14639 778 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 KIAA0391O15091 583 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 FOSL2P15408 326 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 GARTP22102 1010 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 PPM1AP35813 382 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 ACOT2P49753 483 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 AFF1P51825 1210 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 PPP2R3AQ06190 1150 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 EHHADHQ08426 723 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 GRIK3Q13003 919 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 STK4Q13043 487 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 HSP90AA2PQ14568 343 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 BMS1Q14692 1282 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 PTPROQ16827 1216 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 KNOP1Q1ED39 458 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 SLC39A4Q6P5W5 647 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 EPM2AIP1Q7L775 607 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 SPRED2Q7Z698 418 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 ZNF280BQ86YH2 543 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 AOPEPQ8N6M6 819 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 KLHL23Q8NBE8 558 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 GLIS3Q8NEA6 775 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 GOLGA5Q8TBA6 731 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 MICAL1Q8TDZ2 1067 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 GDPD5Q8WTR4 605 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 SCFD1Q8WVM8 642 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 P2RX5Q93086 422 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 TMEM169Q96HH4 297 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 CDX2Q99626 313 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 COLEC11Q9BWP8 271 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 PCIF1Q9H4Z3 704 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 PLEKHA5Q9HAU0 1116 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 SLC38A7Q9NVC3 462 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 MIOSQ9NXC5 875 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 MTMR10Q9NXD2 777 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 SPG21Q9NZD8 308 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 CGNQ9P2M7 1197 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 HCSTQ9UBK5 93 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 STYXL1Q9Y6J8 313 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 COL4A6Q14031 1691 aa10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 PDCD11Q14690 1871 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-239ENST00000637297 PLXNA4Q9HCM2 1894 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 GOLGA6L6A8MZA4 724 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 NT5C1B-RDH14C9J2C7 533 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 H3BNC9 293 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 CLIC2O15247 247 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 INPPL1O15357 1258 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 XPOTO43592 962 aaKnown RBP10□□□□□ -0.81
CACNA1A-239ENST00000637297 CALUO43852 315 aaPredicted RBP10□□□□□ -0.81
CACNA1A-239ENST00000637297 DDHD2O94830 711 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 CSPG5O95196 566 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 GALTP07902 379 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 CXCL8P10145 99 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 CA8P35219 290 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 PBX3P40426 434 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 TNFSF9P41273 254 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 SNRPFP62306 86 aaKnown RBP10□□□□□ -0.81
CACNA1A-239ENST00000637297 TUSC3Q13454 348 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 STIM1Q13586 685 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 GLRA4Q5JXX5 417 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 ISM2Q6H9L7 571 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 CD302Q8IX05 232 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 DHX40Q8IX18 779 aaKnown RBP10□□□□□ -0.81
CACNA1A-239ENST00000637297 GPD1LQ8N335 351 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 MLKLQ8NB16 471 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 KIAA0895Q8NCT3 520 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 MYLIPQ8WY64 445 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 SAAL1Q96ER3 474 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 KIF12Q96FN5 646 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 FAM213AQ9BRX8 229 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 TMEM175Q9BSA9 504 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 TRIM5Q9C035 493 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 HAPLN2Q9GZV7 340 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 IKZF4Q9H2S9 585 aa10□□□□□ -0.81
CACNA1A-239ENST00000637297 ALG13Q9NP73 1137 aaKnown RBP10□□□□□ -0.81
CACNA1A-239ENST00000637297 DNAJB4Q9UDY4 337 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms