RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 PGBD4Q96DM1 585 aa16.89■□□□□ 0.29
CTSD-207ENST00000636571 FAM212AQ96EL1 285 aa16.89■□□□□ 0.29
CTSD-207ENST00000636571 ACAP3Q96P50 834 aa16.89■□□□□ 0.29
CTSD-207ENST00000636571 ZBED2Q9BTP6 218 aa16.89■□□□□ 0.29
CTSD-207ENST00000636571 CCDC94Q9BW85 323 aaPredicted RBP16.89■□□□□ 0.29
CTSD-207ENST00000636571 FANCLQ9NW38 375 aa16.89■□□□□ 0.29
CTSD-207ENST00000636571 DMAC2Q9NW81 257 aa16.89■□□□□ 0.29
CTSD-207ENST00000636571 CACNG4Q9UBN1 327 aa16.89■□□□□ 0.29
CTSD-207ENST00000636571 NFE2L3Q9Y4A8 694 aa16.89■□□□□ 0.29
CTSD-207ENST00000636571 KIAA1671Q9BY89 1806 aa16.89■□□□□ 0.29
CTSD-207ENST00000636571 SMTNL1A8MU46 457 aa16.88■□□□□ 0.29
CTSD-207ENST00000636571 PTGESO14684 152 aa16.88■□□□□ 0.29
CTSD-207ENST00000636571 CALUO43852 315 aaPredicted RBP16.88■□□□□ 0.29
CTSD-207ENST00000636571 B4GALT3O60512 393 aa16.88■□□□□ 0.29
CTSD-207ENST00000636571 NR2F2P24468 414 aa16.88■□□□□ 0.29
CTSD-207ENST00000636571 SCNN1GP51170 649 aa16.88■□□□□ 0.29
CTSD-207ENST00000636571 TPD52L1Q16890 204 aaPredicted RBP16.88■□□□□ 0.29
CTSD-207ENST00000636571 C12orf56Q8IXR9 622 aa16.88■□□□□ 0.29
CTSD-207ENST00000636571 GPD1LQ8N335 351 aa16.88■□□□□ 0.29
CTSD-207ENST00000636571 ENOX1Q8TC92 643 aaKnown RBP16.88■□□□□ 0.29
CTSD-207ENST00000636571 PHOSPHO2Q8TCD6 241 aa16.88■□□□□ 0.29
CTSD-207ENST00000636571 ZNF689Q96CS4 500 aaPredicted RBP16.88■□□□□ 0.29
CTSD-207ENST00000636571 SNX27Q96L92 541 aa16.88■□□□□ 0.29
CTSD-207ENST00000636571 ZMAT2Q96NC0 199 aaKnown RBP16.88■□□□□ 0.29
CTSD-207ENST00000636571 YME1L1Q96TA2 773 aa16.88■□□□□ 0.29
CTSD-207ENST00000636571 TLL1O43897 1013 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 EXTL3O43909 919 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 EXOC3O60645 756 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 CLTAP09496 248 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 HTRA4P83105 476 aaPredicted RBP16.87■□□□□ 0.29
CTSD-207ENST00000636571 CEP135Q66GS9 1140 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 APBB1IPQ7Z5R6 666 aaPredicted RBP16.87■□□□□ 0.29
CTSD-207ENST00000636571 CREBRFQ8IUR6 639 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 XXYLT1Q8NBI6 393 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 PBX4Q9BYU1 374 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 SAMSN1Q9NSI8 373 aaKnown RBP16.87■□□□□ 0.29
CTSD-207ENST00000636571 YBX2Q9Y2T7 364 aaKnown RBP16.87■□□□□ 0.29
CTSD-207ENST00000636571 LACTBL1A8MY62 500 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 AKAP3O75969 853 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 PPP1R2P41236 205 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 ADAM9Q13443 819 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 SNRNP35Q16560 246 aaKnown RBP16.87■□□□□ 0.29
CTSD-207ENST00000636571 CT47A1Q5JQC4 288 aaPredicted RBP16.87■□□□□ 0.29
CTSD-207ENST00000636571 SPATA1Q5VX52 437 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 GLB1LQ6UWU2 654 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 ALKAL1Q6UXT8 129 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 ABI1Q8IZP0 508 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 GOLGA5Q8TBA6 731 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 PLEKHO2Q8TD55 490 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 FBXL18Q96ME1 805 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 RPF1Q9H9Y2 349 aaKnown RBP16.87■□□□□ 0.29
CTSD-207ENST00000636571 GIT1Q9Y2X7 761 aa16.87■□□□□ 0.29
CTSD-207ENST00000636571 TTC26A0AVF1 554 aa16.86■□□□□ 0.29
CTSD-207ENST00000636571 IKBKBO14920 756 aa16.86■□□□□ 0.29
CTSD-207ENST00000636571 YARSP54577 528 aaKnown RBP16.86■□□□□ 0.29
CTSD-207ENST00000636571 SNRPFP62306 86 aaKnown RBP16.86■□□□□ 0.29
CTSD-207ENST00000636571 EDRF1Q3B7T1 1238 aa16.86■□□□□ 0.29
CTSD-207ENST00000636571 NOMO2Q5JPE7 1267 aa16.86■□□□□ 0.29
CTSD-207ENST00000636571 LMBRD2Q68DH5 695 aaPredicted RBP16.86■□□□□ 0.29
CTSD-207ENST00000636571 ZNF280BQ86YH2 543 aa16.86■□□□□ 0.29
CTSD-207ENST00000636571 SLC9A9Q8IVB4 645 aa16.86■□□□□ 0.29
CTSD-207ENST00000636571 HACE1Q8IYU2 909 aa16.86■□□□□ 0.29
CTSD-207ENST00000636571 RABGGTAQ92696 567 aa16.86■□□□□ 0.29
CTSD-207ENST00000636571 TSG101Q99816 390 aa16.86■□□□□ 0.29
CTSD-207ENST00000636571 TMEM117Q9H0C3 514 aa16.86■□□□□ 0.29
CTSD-207ENST00000636571 HSD3B7Q9H2F3 369 aa16.86■□□□□ 0.29
CTSD-207ENST00000636571 TBC1D13Q9NVG8 400 aa16.86■□□□□ 0.29
CTSD-207ENST00000636571 RBAKQ9NYW8 714 aaPredicted RBP16.86■□□□□ 0.29
CTSD-207ENST00000636571 CGNQ9P2M7 1197 aaKnown RBP16.86■□□□□ 0.29
CTSD-207ENST00000636571 BICDL2A1A5D9 508 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 DDHD2O94830 711 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 NFICP08651 508 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 PBX3P40426 434 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 LRRC63Q05C16 580 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 PTPRJQ12913 1337 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 SCARA3Q6AZY7 606 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 FAM43BQ6ZT52 329 aaPredicted RBP16.85■□□□□ 0.29
CTSD-207ENST00000636571 NLRC5Q86WI3 1866 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 BRSK2Q8IWQ3 736 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 CSGALNACT2Q8N6G5 542 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 RAD9AQ99638 391 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 SRRTQ9BXP5 876 aaKnown RBP16.85■□□□□ 0.29
CTSD-207ENST00000636571 GOLGA2P5Q9HBQ8 144 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 PDE11AQ9HCR9 933 aa16.85■□□□□ 0.29
CTSD-207ENST00000636571 MRPL42Q9Y6G3 142 aaKnown RBP16.85■□□□□ 0.29
CTSD-207ENST00000636571 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.84■□□□□ 0.29
CTSD-207ENST00000636571 SMIM28A0A1B0GU29 152 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.84■□□□□ 0.29
CTSD-207ENST00000636571 LDHAP00338 332 aaKnown RBP16.84■□□□□ 0.29
CTSD-207ENST00000636571 CA3P07451 260 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 ATP1A3P13637 1013 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 GUCY2FP51841 1108 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 BTG3Q14201 252 aaPredicted RBP16.84■□□□□ 0.29
CTSD-207ENST00000636571 NAB2Q15742 525 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 NFIL3Q16649 462 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 XKR4Q5GH76 650 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 JADE1Q6IE81 842 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 ZC3H3Q8IXZ2 948 aaKnown RBP16.84■□□□□ 0.29
CTSD-207ENST00000636571 EFCAB13Q8IY85 973 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 C18orf25Q96B23 403 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms