RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 DMTF1Q9Y222 760 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 MYPNQ86TC9 1320 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 HMGXB3Q12766 1538 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 AATKQ6ZMQ8 1374 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 CUL7Q14999 1698 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 SHROOM4Q9ULL8 1493 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 A0A1B0GTW7 788 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 CCDC78A2IDD5 438 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 DRGXA6NNA5 263 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 ELL2O00472 640 aaPredicted RBP1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 ADCY6O43306 1168 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 PEX1O43933 1283 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 NTN1O95631 604 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 PRKCGP05129 697 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 FGFR4P22455 802 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 XPAP23025 273 aaPredicted RBP1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 PPARAQ07869 468 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 ADCY1Q08828 1119 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 RASA3Q14644 834 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 C21orf62-AS1Q17RA5 79 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 RRP12Q5JTH9 1297 aaKnown RBP1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 MFSD14BQ5SR56 506 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 PRAMEF14Q5SWL7 426 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 ATXN7L2Q5T6C5 722 aaPredicted RBP1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 KIAA1614Q5VZ46 1190 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 C11orf87Q6NUJ2 197 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 ZNF517Q6ZMY9 492 aaPredicted RBP1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 RHOT2Q8IXI1 618 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 CDYL2Q8N8U2 506 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 FBXO18Q8NFZ0 1043 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 PPP1R14CQ8TAE6 165 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 SLC35B2Q8TB61 432 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 SH3TC2Q8TF17 1288 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 GAB3Q8WWW8 586 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 NACC2Q96BF6 587 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 SARAFQ96BY9 339 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 CABP5Q9NP86 173 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 KCTD5Q9NXV2 234 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 H2AFY2Q9P0M6 372 aaPredicted RBP1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 USP25Q9UHP3 1055 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 ST3GAL5Q9UNP4 418 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 TBC1D30Q9Y2I9 924 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 MTO1Q9Y2Z2 717 aaKnown RBP1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 MSRB2Q9Y3D2 182 aa1.59□□□□□ -2.15
SMARCB1-209ENST00000635578 ZNF804BA4D1E1 1349 aa1.59□□□□□ -2.16
SMARCB1-209ENST00000635578 ERCC6Q03468 1493 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 SETD1BQ9UPS6 1966 aaKnown RBP1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 WDR62O43379 1518 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 MYO15BQ96JP2 1530 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 CCDC187A0A096LP49 1063 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 A0A1W2PR48 441 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 ORC4O43929 436 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 OPA1O60313 960 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 NRP2O60462 931 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 ERN1O75460 977 aaKnown RBP1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 SEC24DO94855 1032 aaPredicted RBP1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 CLSTN1O94985 981 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 RAPGEF3O95398 923 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 ASMTLO95671 621 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 GPANK1O95872 356 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 LTA4HP09960 611 aaKnown RBP1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 SNHG28P0DPA3 235 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 KELP23276 732 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 SREBF1P36956 1147 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 POLGP54098 1239 aaPredicted RBP1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 NRG3P56975 720 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 TUBA4AP68366 448 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 GRM1Q13255 1194 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 ZNF460Q14592 562 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 GEN1Q17RS7 908 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 TRIM61Q5EBN2 209 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 ZBTB41Q5SVQ8 909 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 FCRLBQ6BAA4 426 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 AWAT2Q6E213 333 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 KRTAP5-1Q6L8H4 278 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 ZCCHC8Q6NZY4 707 aaKnown RBP1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 ABHD15Q6UXT9 468 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 PEG10Q86TG7 708 aaKnown RBP1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 THNSL2Q86YJ6 484 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 GLB1L2Q8IW92 636 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 LILRB2Q8N423 598 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 ZSWIM2Q8NEG5 633 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 REPS2Q8NFH8 660 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 SSH3Q8TE77 659 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 TFAP2BQ92481 460 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 APPBP2Q92624 585 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 RPL36ALQ969Q0 106 aaKnown RBP1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 MKL1Q969V6 931 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 FUBP3Q96I24 572 aaKnown RBP eCLIP1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 REXO4Q9GZR2 422 aaKnown RBP1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 RNPEPQ9H4A4 650 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 ZMAT4Q9H898 229 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 UNKLQ9H9P5 680 aaKnown RBP1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 TRIM39Q9HCM9 518 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 NRIP3Q9NQ35 241 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 MTMR4Q9NYA4 1195 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 LRP12Q9Y561 859 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 PTCH2Q9Y6C5 1203 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 WNT6Q9Y6F9 365 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 MROH2BQ7Z745 1585 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms