RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 MAPRE2Q15555 327 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 TRIM16LQ309B1 348 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 TRAPPC11Q7Z392 1133 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 CNKSR1Q969H4 720 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 RBM15Q96T37 977 aaKnown RBP eCLIP12.32□□□□□ -0.44
COL11A1-211ENST00000635193 ROPN1BQ9BZX4 212 aaPredicted RBP12.32□□□□□ -0.44
COL11A1-211ENST00000635193 ROPN1Q9HAT0 212 aaPredicted RBP12.32□□□□□ -0.44
COL11A1-211ENST00000635193 IL1RAPL1Q9NZN1 696 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 FNDC3AQ9Y2H6 1198 aaKnown RBP12.32□□□□□ -0.44
COL11A1-211ENST00000635193 ARHGEF40Q8TER5 1519 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 NPHP3-ACAD11A0A0J9YXS1 232 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 HNRNPCL2B2RXH8 293 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 PPP1R3GB7ZBB8 358 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 CYP26A1O43174 497 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 ANTXR2P58335 489 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 DSG1Q02413 1049 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 SLC20A2Q08357 652 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 CDR2LQ86X02 465 aaPredicted RBP12.32□□□□□ -0.44
COL11A1-211ENST00000635193 FLAD1Q8NFF5 587 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 SCG3Q8WXD2 468 aaKnown RBP12.32□□□□□ -0.44
COL11A1-211ENST00000635193 L1RE1Q9UN81 338 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 MINPP1Q9UNW1 487 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 CDC42BPBQ9Y5S2 1711 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 H3BQF6 201 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 XPO1O14980 1071 aaKnown RBP12.32□□□□□ -0.44
COL11A1-211ENST00000635193 HABP4Q5JVS0 413 aaKnown RBP12.32□□□□□ -0.44
COL11A1-211ENST00000635193 ADGRF4Q8IZF3 695 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.32□□□□□ -0.44
COL11A1-211ENST00000635193 USP21Q9UK80 565 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 AURKCQ9UQB9 309 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 C16orf96A6NNT2 1141 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 B2RBV5 119 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 TMCC1O94876 653 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 PDHBP11177 359 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 P3H1Q32P28 736 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 LRRC8BQ6P9F7 803 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 POTEAQ6S8J7 498 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 RBM43Q6ZSC3 357 aaKnown RBP12.32□□□□□ -0.44
COL11A1-211ENST00000635193 METTL23Q86XA0 190 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 C4orf33Q8N1A6 199 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 FAM193BQ96PV7 902 aaPredicted RBP12.32□□□□□ -0.44
COL11A1-211ENST00000635193 EIF2AK1Q9BQI3 630 aaKnown RBP12.32□□□□□ -0.44
COL11A1-211ENST00000635193 PARVAQ9NVD7 372 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 SLC12A6Q9UHW9 1150 aa12.32□□□□□ -0.44
COL11A1-211ENST00000635193 HSD17B3P37058 310 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 USP11P51784 963 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 ITIH4Q14624 930 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 CCDC85BQ15834 202 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-211ENST00000635193 OR6B3Q8NGW1 331 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 CASP10Q92851 521 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 C9orf72Q96LT7 481 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 NLRP4Q96MN2 994 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 ADAM33Q9BZ11 813 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 CELF4Q9BZC1 486 aaKnown RBP12.31□□□□□ -0.44
COL11A1-211ENST00000635193 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 APEX2Q9UBZ4 518 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 AP5Z1O43299 807 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 GH2P01242 217 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 ATP6V1B1P15313 513 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 ERVK-24P63145 666 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 HEATR6Q6AI08 1181 aaKnown RBP12.31□□□□□ -0.44
COL11A1-211ENST00000635193 ARHGAP22Q7Z5H3 698 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 B4GALNT2Q8NHY0 566 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 ISCA1Q9BUE6 129 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 CPSF3Q9UKF6 684 aaKnown RBP12.31□□□□□ -0.44
COL11A1-211ENST00000635193 CDC42BPGQ6DT37 1551 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 P4HBP07237 508 aaKnown RBP12.31□□□□□ -0.44
COL11A1-211ENST00000635193 TYK2P29597 1187 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 BCAR1P56945 870 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 RCN1Q15293 331 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 KYNUQ16719 465 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 PLD3Q8IV08 490 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 ERP44Q9BS26 406 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 TBC1D22BQ9NU19 505 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 KIF17Q9P2E2 1029 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 UVRAGQ9P2Y5 699 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 CRB1P82279 1406 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 ABCB11O95342 1321 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 S100A5P33763 92 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 SLC27A3Q5K4L6 730 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 TRAF7Q6Q0C0 670 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 ANKS1AQ92625 1134 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 PPP1R16BQ96T49 567 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 SIKE1Q9BRV8 207 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 PSMC3IPQ9P2W1 217 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-211ENST00000635193 MTO1Q9Y2Z2 717 aaKnown RBP12.31□□□□□ -0.44
COL11A1-211ENST00000635193 RSPH10B2B2RC85 870 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 RSPH10BP0C881 870 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 KLRC1P26715 233 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 SDC4P31431 198 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 DEFA1P59665 94 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 DEFA3P59666 94 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 INPP5AQ14642 412 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 QRICH1Q2TAL8 776 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 LRRC34Q8IZ02 419 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 GALNT4Q8N4A0 578 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 MDM1Q8TC05 714 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 LXNQ9BS40 222 aa12.31□□□□□ -0.44
COL11A1-211ENST00000635193 MADDQ8WXG6 1647 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 A2ML1A8K2U0 1454 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms