RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.33□□□□□ -1.88
SMARCB1-208ENST00000634926 SLC7A14Q8TBB6 771 aa3.33□□□□□ -1.88
SMARCB1-208ENST00000634926 CPT1CQ8TCG5 803 aa3.33□□□□□ -1.88
SMARCB1-208ENST00000634926 LRFN3Q9BTN0 628 aa3.33□□□□□ -1.88
SMARCB1-208ENST00000634926 SLC6A15Q9H2J7 730 aa3.33□□□□□ -1.88
SMARCB1-208ENST00000634926 SMURF1Q9HCE7 757 aa3.33□□□□□ -1.88
SMARCB1-208ENST00000634926 SORCS3Q9UPU3 1222 aa3.33□□□□□ -1.88
SMARCB1-208ENST00000634926 RBM8AQ9Y5S9 174 aaKnown RBP3.33□□□□□ -1.88
SMARCB1-208ENST00000634926 NUP155O75694 1391 aa3.33□□□□□ -1.88
SMARCB1-208ENST00000634926 TOPAZ1Q8N9V7 1692 aa3.33□□□□□ -1.88
SMARCB1-208ENST00000634926 RGPD8O14715 1765 aaPredicted RBP3.33□□□□□ -1.88
SMARCB1-208ENST00000634926 EYA4O95677 639 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 PYGMP11217 842 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 CPEP16870 476 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 IGFALSP35858 605 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 BPIFB4P59827 614 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 DHCR24Q15392 516 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 PRR16Q569H4 304 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 BRDTQ58F21 947 aaPredicted RBP3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 FKBP15Q5T1M5 1219 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 NOL8Q76FK4 1167 aaKnown RBP3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 DDX46Q7L014 1031 aaKnown RBP3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 FGD2Q7Z6J4 655 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 NLGN4XQ8N0W4 816 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 UBR7Q8N806 425 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 MDGA1Q8NFP4 955 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 PCDH19Q8TAB3 1148 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 ASB15Q8WXK1 588 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 ANKS1AQ92625 1134 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 SCLYQ96I15 445 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 ZFYVE21Q9BQ24 234 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 WDR11Q9BZH6 1224 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 SERHL2Q9H4I8 314 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 CHPF2Q9P2E5 772 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 NDOR1Q9UHB4 597 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 TNPO3Q9Y5L0 923 aaKnown RBP3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 DLC1Q96QB1 1528 aa3.32□□□□□ -1.88
SMARCB1-208ENST00000634926 ARHGEF28Q8N1W1 1705 aaKnown RBP3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 RREB1Q92766 1687 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 PHRF1Q9P1Y6 1649 aaKnown RBP3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 AFF2P51816 1311 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 TCRBV16S1A1N1A0A5B0 115 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 PRAMEF22A3QJZ6 481 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 DNAJC9-AS1A6NH13 148 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 B4E1Z4 1266 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 ZNF561-AS1K7EIQ3 104 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 AQP7O14520 342 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 WNT9AO14904 365 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 OPA1O60313 960 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 NAT1P18440 290 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 FLT3P36888 993 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 RGS19P49795 217 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 EVA1CP58658 441 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 HERVK_113P62684 666 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 TIGD2Q4W5G0 525 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 FIGNQ5HY92 759 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 ODR4Q5SWX8 454 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 ZNF772Q68DY9 489 aaPredicted RBP3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 NAIF1Q69YI7 327 aaPredicted RBP3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 STRA8Q7Z7C7 330 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 SIMC1Q8NDZ2 872 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 ATL2Q8NHH9 583 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 WASF1Q92558 559 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 MAGEB10Q96LZ2 347 aaPredicted RBP3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 ORAI3Q9BRQ5 295 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 MTFR1LQ9H019 292 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 IL23AQ9NPF7 189 aa3.31□□□□□ -1.88
SMARCB1-208ENST00000634926 RGPD3A6NKT7 1758 aaPredicted RBP3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 RGPD4Q7Z3J3 1758 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 LMO7Q8WWI1 1683 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 RALGAPBQ86X10 1494 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 DISP2A7MBM2 1401 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 LRPPRCP42704 1394 aaKnown RBP3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 GOLGA6L6A8MZA4 724 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 BRINP1O60477 761 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 CRTAMO95727 393 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 APPP05067 770 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 HK1P19367 917 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 NEK4P51957 841 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 TCIRG1Q13488 830 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 ZNF460Q14592 562 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 PCBP1Q15365 356 aaKnown RBP eCLIP3.3□□□□□ -1.883e-10■■■□□ 18.2
SMARCB1-208ENST00000634926 RNF219Q5W0B1 726 aaPredicted RBP3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 CCDC62Q6P9F0 684 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 UBE2R2Q712K3 238 aaPredicted RBP3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 NECAB2Q7Z6G3 386 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 KIF18BQ86Y91 864 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 Q8N9P0 234 aaPredicted RBP3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 BOLLQ8N9W6 283 aaKnown RBP3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 LEO1Q8WVC0 666 aaPredicted RBP3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 JDP2Q8WYK2 163 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 SLC7A6OSQ96CW6 309 aaPredicted RBP3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 ZNF512Q96ME7 567 aaPredicted RBP3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 TCF25Q9BQ70 676 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 CYP4F11Q9HBI6 524 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 G3BP2Q9UN86 482 aaKnown RBP3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 THRAP3Q9Y2W1 955 aaKnown RBP3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 WNK3Q9BYP7 1800 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 COL14A1Q05707 1796 aaKnown RBP3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 RGPD1P0DJD0 1748 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms