RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 LMBRD2Q68DH5 695 aaPredicted RBP13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 DDX1Q92499 740 aaKnown RBP13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 ZNF653Q96CK0 615 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 FAM84AQ96KN4 292 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 GOLGA6AQ9NYA3 693 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 GTF3C4Q9UKN8 822 aa13.14□□□□□ -0.31
PHACTR4-206ENST00000632421 BHMG1C9JSJ3 638 aaPredicted RBP13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 CYP1A2P05177 515 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 MESDQ14696 234 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 TARBP2Q15633 366 aaKnown RBP13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 PPP2R5EQ16537 467 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 ZACNQ401N2 412 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 CFAP58Q5T655 872 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 ZNF564Q8TBZ8 553 aaPredicted RBP13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 MORC4Q8TE76 937 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 ZSWIM1Q9BR11 485 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 NUP85Q9BW27 656 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 CHORDC1Q9UHD1 332 aaPredicted RBP13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 RRP15Q9Y3B9 282 aaKnown RBP13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 ZNFX1Q9P2E3 1918 aaKnown RBP13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 GGPS1O95749 300 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 PIK3CAP42336 1068 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 PPFIA1Q13136 1202 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 ZNF211Q13398 564 aaPredicted RBP13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 NAA35Q5VZE5 725 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 ERO1BQ86YB8 467 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 FAM76AQ8TAV0 307 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 ZIM3Q96PE6 472 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 MSTO1Q9BUK6 570 aa13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 RBAKQ9NYW8 714 aaPredicted RBP13.13□□□□□ -0.31
PHACTR4-206ENST00000632421 LDHAP00338 332 aaKnown RBP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 HLA-DRAP01903 254 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 COMTP21964 271 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 TCF7P36402 384 aaPredicted RBP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 BIRC3Q13489 604 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 TDRD10Q5VZ19 366 aaKnown RBP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 ACAD10Q6JQN1 1059 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 METTL7BQ6UX53 244 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 CRELD2Q6UXH1 353 aaPredicted RBP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 SEPT1Q8WYJ6 367 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 ZBTB45Q96K62 511 aaPredicted RBP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 TARS2Q9BW92 718 aaKnown RBP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 HAPLN2Q9GZV7 340 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 TMEM134Q9H6X4 195 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 ANKFY1Q9P2R3 1169 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 UVRAGQ9P2Y5 699 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 LOC102724159A0A0B4J2E5 919 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 TTI1O43156 1089 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 C4BPAP04003 597 aaKnown RBP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 PTENP60484 403 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 PWP2Q15269 919 aaKnown RBP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 EEPD1Q7L9B9 569 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 IQCKQ8N0W5 287 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 CLMNQ96JQ2 1002 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 MPHOSPH6Q99547 160 aaKnown RBP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 TRPC6Q9Y210 931 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 CXCL11O14625 94 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 CNMDO75829 334 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 SLC25A27O95847 323 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 ECHS1P30084 290 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 HSPA9P38646 679 aaKnown RBP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 GTF2A1P52655 376 aaPredicted RBP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 WNT7BP56706 349 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 CAPSQ13938 189 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 CLEC16AQ2KHT3 1053 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 DDX42Q86XP3 938 aaKnown RBP eCLIP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 KRT35Q92764 455 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 TSPYL1Q9H0U9 437 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 WNT8AQ9H1J5 351 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 AZI2Q9H6S1 392 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 RNF181Q9P0P0 153 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 UTP11Q9Y3A2 253 aaKnown RBP13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 NR2E1Q9Y466 385 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 LRRC37A2A6NM11 1700 aa13.12□□□□□ -0.31
PHACTR4-206ENST00000632421 A0A0B4J269 797 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 GRIN3BO60391 1043 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 LY6KQ17RY6 165 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 LEKR1Q6ZMV7 388 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 ADAT2Q7Z6V5 191 aaKnown RBP13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 FAM167AQ96KS9 214 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 CELF4Q9BZC1 486 aaKnown RBP13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 ADCY3O60266 1144 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 MAFO75444 373 aaPredicted RBP13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 ACTN2P35609 894 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 MARCKSL1P49006 195 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 POU5F1Q01860 360 aaKnown RBP13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 AGTPBP1Q9UPW5 1226 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 PPME1Q9Y570 386 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 PCDHB2Q9Y5E7 798 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 PTPRJQ12913 1337 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 SPOPO43791 374 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 HSPA6P17066 643 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 NF2P35240 595 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 BPIFB4P59827 614 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 ZBTB41Q5SVQ8 909 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 SRLQ86TD4 932 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 ZNF677Q86XU0 584 aa13.11□□□□□ -0.31
PHACTR4-206ENST00000632421 SEC14L1Q92503 715 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms