RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ARSHQ5FYA8 562 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 ZNF569Q5MCW4 686 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 LRRC55Q6ZSA7 311 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 EMID1Q96A84 441 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 SCLYQ96I15 445 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 EPN1Q9Y6I3 576 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 EPHB6O15197 1021 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 ATG7O95352 703 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 CD19P15391 556 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 GCLMP48507 274 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 SURF1Q15526 300 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 IFI16Q16666 785 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 ZCWPW2Q504Y3 356 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 HSP90B2PQ58FF3 399 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 MICAL1Q8TDZ2 1067 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 EIF3DO15371 548 aaKnown RBP eCLIP13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 ADCY6O43306 1168 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 TOM1L1O75674 476 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 C22orf31O95567 290 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 SELPP16109 830 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 PAFAH1B1P43034 410 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 GPC3P51654 580 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 FIGNQ5HY92 759 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 GLRA4Q5JXX5 417 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 INTS8Q75QN2 995 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 RPUSD2Q8IZ73 545 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 KIAA0319LQ8IZA0 1049 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 SPIRE2Q8WWL2 714 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 OLFML3Q9NRN5 406 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 C1orf112Q9NSG2 853 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 RAB21Q9UL25 225 aa13.44□□□□□ -0.26
SYNGAP1-207ENST00000628646 TRIM49P0CI25 452 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 TRIM49CP0CI26 452 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 P4HA1P13674 534 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 EN2P19622 333 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 MYL7Q01449 175 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 MSANTD4Q8NCY6 345 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 TAF4BQ92750 862 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 CBWD1Q9BRT8 395 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 NLRC4Q9NPP4 1024 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 XPNPEP1Q9NQW7 623 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 ST3GAL5Q9UNP4 418 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 ACKR2O00590 384 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 HNRNPH3P31942 346 aaKnown RBP13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 CRYBB1P53674 252 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 GABPB1Q06547 395 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 TERF2Q15554 542 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 TAF12Q16514 161 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 GBP6Q6ZN66 633 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 RUFY4Q6ZNE9 571 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 LRRC8DQ7L1W4 858 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 TTC16Q8NEE8 873 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 SCFD1Q8WVM8 642 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 GOLGA1Q92805 767 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 HVCN1Q96D96 273 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 MYO1AQ9UBC5 1043 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 ATP4AP20648 1035 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 KCNA1Q09470 495 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 ZBTB45Q96K62 511 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 PNKPQ96T60 521 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 FGFBP2Q9BYJ0 223 aa13.43□□□□□ -0.26
SYNGAP1-207ENST00000628646 A0A1W2PQJ5 194 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 N4BP1O75113 896 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 PTENP60484 403 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 TNNC1P63316 161 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 IKBKEQ14164 716 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 BMS1Q14692 1282 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 MAN2A1Q16706 1144 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 FOXR2Q6PJQ5 311 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 MPZL3Q6UWV2 235 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 BEST2Q8NFU1 509 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 FUT8Q9BYC5 575 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 AGPAT3Q9NRZ7 376 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 CTAGE15A4D2H0 777 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 AFPP02771 609 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 CLTBP09497 229 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 CTAGE8P0CG41 777 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 STAG3L1P0CL83 205 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 SNRNP35Q16560 246 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 MAP9Q49MG5 647 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 DSTYKQ6XUX3 929 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 CTAGE6Q86UF2 777 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 CTAGE4Q8IX94 777 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 DIS3LQ8TF46 1054 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 MCM3APO60318 1980 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 PDE4DIPQ5VU43 2346 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 CDK17Q00537 523 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 PTK7Q13308 1070 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 SNX17Q15036 470 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 TRAPPC11Q7Z392 1133 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 DNAJC5GQ8N7S2 189 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 BSNDQ8WZ55 320 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 YME1L1Q96TA2 773 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 LSM14BQ9BX40 385 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 LACRTQ9GZZ8 138 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 HAUS4Q9H6D7 363 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 VAMP7P51809 220 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 CASP5P51878 434 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms