RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 VPS37CA5D8V6 355 aaPredicted RBP18.04■□□□□ 0.48
LINC00628-201ENST00000628516 SFI1A8K8P3 1242 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 PDCP20941 246 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 RAD51AP2Q09MP3 1159 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 MAPK7Q13164 816 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 HYIQ5T013 277 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 HDAC7Q8WUI4 952 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 CDK5RAP3Q96JB5 506 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 PNMA5Q96PV4 448 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 TTPALQ9BTX7 342 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 TIPINQ9BVW5 301 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 MRPL4Q9BYD3 311 aaKnown RBP18.04■□□□□ 0.48
LINC00628-201ENST00000628516 NT5C3AQ9H0P0 336 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 SMOC2Q9H3U7 446 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 PLEKHA4Q9H4M7 779 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 C17orf75Q9HAS0 396 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 ARHGAP28Q9P2N2 729 aa18.04■□□□□ 0.48
LINC00628-201ENST00000628516 RBM19Q9Y4C8 960 aaKnown RBP18.04■□□□□ 0.48
LINC00628-201ENST00000628516 ZDBF2Q9HCK1 2354 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 C1RP00736 705 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 SYT1P21579 422 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 YARSP54577 528 aaKnown RBP18.03■□□□□ 0.48
LINC00628-201ENST00000628516 OSTNP61366 133 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 NHLH1Q02575 133 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 ELAVL2Q12926 359 aaKnown RBP18.03■□□□□ 0.48
LINC00628-201ENST00000628516 BECN1Q14457 450 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 ZNF568Q3ZCX4 644 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 IER5LQ5T953 404 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 ARL6IP4Q66PJ3 421 aaKnown RBP18.03■□□□□ 0.48
LINC00628-201ENST00000628516 CYP26C1Q6V0L0 522 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 TAS1R3Q7RTX0 852 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 CEP120Q8N960 986 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 SMG7Q92540 1137 aaKnown RBP18.03■□□□□ 0.48
LINC00628-201ENST00000628516 CCDC94Q9BW85 323 aaPredicted RBP18.03■□□□□ 0.48
LINC00628-201ENST00000628516 TARS2Q9BW92 718 aaKnown RBP18.03■□□□□ 0.48
LINC00628-201ENST00000628516 CDT1Q9H211 546 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 PIDD1Q9HB75 910 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 WDR6Q9NNW5 1121 aaKnown RBP18.03■□□□□ 0.48
LINC00628-201ENST00000628516 DENND4AQ7Z401 1863 aa18.03■□□□□ 0.48
LINC00628-201ENST00000628516 C2orf16Q68DN1 1984 aa18.02■□□□□ 0.48
LINC00628-201ENST00000628516 SLC16A4O15374 487 aa18.02■□□□□ 0.48
LINC00628-201ENST00000628516 PDGFBP01127 241 aaPredicted RBP18.02■□□□□ 0.48
LINC00628-201ENST00000628516 GUCY2CP25092 1073 aa18.02■□□□□ 0.48
LINC00628-201ENST00000628516 GRM5P41594 1212 aa18.02■□□□□ 0.48
LINC00628-201ENST00000628516 PSMD5Q16401 504 aa18.02■□□□□ 0.48
LINC00628-201ENST00000628516 LILRA6Q6PI73 481 aa18.02■□□□□ 0.48
LINC00628-201ENST00000628516 KCTD17Q8N5Z5 321 aa18.02■□□□□ 0.48
LINC00628-201ENST00000628516 SYT2Q8N9I0 419 aaPredicted RBP18.02■□□□□ 0.48
LINC00628-201ENST00000628516 LNX1Q8TBB1 728 aaPredicted RBP18.02■□□□□ 0.48
LINC00628-201ENST00000628516 PIK3R5Q8WYR1 880 aa18.02■□□□□ 0.48
LINC00628-201ENST00000628516 STAMQ92783 540 aa18.02■□□□□ 0.48
LINC00628-201ENST00000628516 ZNF707Q96C28 371 aaPredicted RBP18.02■□□□□ 0.48
LINC00628-201ENST00000628516 PPP1R10Q96QC0 940 aaKnown RBP18.02■□□□□ 0.48
LINC00628-201ENST00000628516 TCHPQ9BT92 498 aa18.02■□□□□ 0.48
LINC00628-201ENST00000628516 RHOBTB2Q9BYZ6 727 aa18.02■□□□□ 0.48
LINC00628-201ENST00000628516 PTPRHQ9HD43 1115 aa18.02■□□□□ 0.48
LINC00628-201ENST00000628516 TOPORSQ9NS56 1045 aaPredicted RBP18.02■□□□□ 0.48
LINC00628-201ENST00000628516 CLUHO75153 1309 aa18.01■□□□□ 0.47
LINC00628-201ENST00000628516 B3GAT3O94766 335 aa18.01■□□□□ 0.47
LINC00628-201ENST00000628516 PLA2G4BP0C869 781 aa18.01■□□□□ 0.47
LINC00628-201ENST00000628516 GBP2P32456 591 aaPredicted RBP18.01■□□□□ 0.47
LINC00628-201ENST00000628516 CLCNKBP51801 687 aa18.01■□□□□ 0.47
LINC00628-201ENST00000628516 VCPP55072 806 aaKnown RBP18.01■□□□□ 0.47
LINC00628-201ENST00000628516 STRN3Q13033 797 aa18.01■□□□□ 0.47
LINC00628-201ENST00000628516 DCLRE1AQ6PJP8 1040 aa18.01■□□□□ 0.47
LINC00628-201ENST00000628516 PRSS33Q8NF86 280 aa18.01■□□□□ 0.47
LINC00628-201ENST00000628516 CLSTN3Q9BQT9 956 aa18.01■□□□□ 0.47
LINC00628-201ENST00000628516 ZDHHC7Q9NXF8 308 aa18.01■□□□□ 0.47
LINC00628-201ENST00000628516 KCNG1Q9UIX4 513 aa18.01■□□□□ 0.47
LINC00628-201ENST00000628516 SMIM28A0A1B0GU29 152 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 N4BP1O75113 896 aaKnown RBP18■□□□□ 0.47
LINC00628-201ENST00000628516 MCF2P10911 925 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 HARSP12081 509 aaKnown RBP18■□□□□ 0.47
LINC00628-201ENST00000628516 PLS3P13797 630 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 IGFBP6P24592 240 aaPredicted RBP18■□□□□ 0.47
LINC00628-201ENST00000628516 AVPR2P30518 371 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 SMTNP53814 917 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 SLC12A3P55017 1021 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 TMEM119Q4V9L6 283 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 PDXDC1Q6P996 788 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 MPZL3Q6UWV2 235 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 PDZRN4Q6ZMN7 1036 aaPredicted RBP18■□□□□ 0.47
LINC00628-201ENST00000628516 ALYREFQ86V81 257 aaKnown RBP18■□□□□ 0.47
LINC00628-201ENST00000628516 SPIRE2Q8WWL2 714 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 AK8Q96MA6 479 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 UROC1Q96N76 676 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 ACAP3Q96P50 834 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 PRRX2Q99811 253 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 NTPCRQ9BSD7 190 aaKnown RBP18■□□□□ 0.47
LINC00628-201ENST00000628516 PRKD2Q9BZL6 878 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 KCNK12Q9HB15 430 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 GOLGA2P5Q9HBQ8 144 aa18■□□□□ 0.47
LINC00628-201ENST00000628516 TMEM189-UBE2V1I3L0A0 370 aa17.99■□□□□ 0.47
LINC00628-201ENST00000628516 ZMYND10O75800 440 aa17.99■□□□□ 0.47
LINC00628-201ENST00000628516 PROZP22891 400 aa17.99■□□□□ 0.47
LINC00628-201ENST00000628516 UBA7P41226 1012 aa17.99■□□□□ 0.47
LINC00628-201ENST00000628516 CACNB1Q02641 598 aaPredicted RBP17.99■□□□□ 0.47
LINC00628-201ENST00000628516 TDGQ13569 410 aa17.99■□□□□ 0.47
LINC00628-201ENST00000628516 UPP1Q16831 310 aa17.99■□□□□ 0.47
LINC00628-201ENST00000628516 LIN9Q5TKA1 542 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms