RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 PCDHA11Q9Y5I1 949 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 TRIOBPQ9H2D6 2365 aa20.49■□□□□ 0.87
MECP2-216ENST00000627864 ZNF233A6NK53 670 aa20.48■□□□□ 0.87
MECP2-216ENST00000627864 LACTBL1A8MY62 500 aa20.48■□□□□ 0.87
MECP2-216ENST00000627864 MEFVO15553 781 aaPredicted RBP20.48■□□□□ 0.87
MECP2-216ENST00000627864 PBX2P40425 430 aa20.48■□□□□ 0.87
MECP2-216ENST00000627864 CASP4P49662 377 aa20.48■□□□□ 0.87
MECP2-216ENST00000627864 PPP2R3AQ06190 1150 aa20.48■□□□□ 0.87
MECP2-216ENST00000627864 HSP90AA2PQ14568 343 aaPredicted RBP20.48■□□□□ 0.87
MECP2-216ENST00000627864 ZSCAN23Q3MJ62 389 aa20.48■□□□□ 0.87
MECP2-216ENST00000627864 TTI2Q6NXR4 508 aa20.48■□□□□ 0.87
MECP2-216ENST00000627864 FBXL18Q96ME1 805 aa20.48■□□□□ 0.87
MECP2-216ENST00000627864 DUSP9Q99956 384 aaKnown RBP20.48■□□□□ 0.87
MECP2-216ENST00000627864 RBAKQ9NYW8 714 aaPredicted RBP20.48■□□□□ 0.87
MECP2-216ENST00000627864 KANSL3Q9P2N6 904 aa20.48■□□□□ 0.87
MECP2-216ENST00000627864 RWDD2AQ9UIY3 292 aa20.48■□□□□ 0.87
MECP2-216ENST00000627864 MSRAQ9UJ68 235 aa20.48■□□□□ 0.87
MECP2-216ENST00000627864 TTC26A0AVF1 554 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 LCHNA4D1U4 455 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 CETN3O15182 167 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 ADRB2P07550 413 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 FKBP3Q00688 224 aaKnown RBP20.47■□□□□ 0.87
MECP2-216ENST00000627864 RNASELQ05823 741 aaKnown RBP20.47■□□□□ 0.87
MECP2-216ENST00000627864 SPAG1Q07617 926 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 RAB30Q15771 203 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 SNRNP35Q16560 246 aaKnown RBP20.47■□□□□ 0.87
MECP2-216ENST00000627864 GLRA4Q5JXX5 417 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 ALKAL1Q6UXT8 129 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 BRSK2Q8IWQ3 736 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 FIBCD1Q8N539 461 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 GSTCDQ8NEC7 633 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 TMEM174Q8WUU8 243 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 EEF2KMTQ96G04 330 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 MRPL9Q9BYD2 267 aaKnown RBP20.47■□□□□ 0.87
MECP2-216ENST00000627864 PBX4Q9BYU1 374 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 GZF1Q9H116 711 aaPredicted RBP20.47■□□□□ 0.87
MECP2-216ENST00000627864 PLEKHA5Q9HAU0 1116 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 TBC1D13Q9NVG8 400 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 FRMD4BQ9Y2L6 1034 aa20.47■□□□□ 0.87
MECP2-216ENST00000627864 YBX2Q9Y2T7 364 aaKnown RBP20.47■□□□□ 0.87
MECP2-216ENST00000627864 SMIM28A0A1B0GU29 152 aa20.46■□□□□ 0.87
MECP2-216ENST00000627864 PTGESO14684 152 aa20.46■□□□□ 0.87
MECP2-216ENST00000627864 INPPL1O15357 1258 aa20.46■□□□□ 0.87
MECP2-216ENST00000627864 CCDC192P0DO97 292 aa20.46■□□□□ 0.87
MECP2-216ENST00000627864 ERCC5P28715 1186 aaPredicted RBP20.46■□□□□ 0.87
MECP2-216ENST00000627864 POU5F1Q01860 360 aaKnown RBP20.46■□□□□ 0.87
MECP2-216ENST00000627864 XKR4Q5GH76 650 aa20.46■□□□□ 0.87
MECP2-216ENST00000627864 SPOUT1Q5T280 376 aaKnown RBP20.46■□□□□ 0.87
MECP2-216ENST00000627864 LRRC55Q6ZSA7 311 aa20.46■□□□□ 0.87
MECP2-216ENST00000627864 C11orf57Q6ZUT1 292 aaPredicted RBP20.46■□□□□ 0.87
MECP2-216ENST00000627864 CD302Q8IX05 232 aa20.46■□□□□ 0.87
MECP2-216ENST00000627864 LRRC43Q8N309 656 aa20.46■□□□□ 0.87
MECP2-216ENST00000627864 SP7Q8TDD2 431 aaPredicted RBP20.46■□□□□ 0.87
MECP2-216ENST00000627864 RSPH1Q8WYR4 309 aa20.46■□□□□ 0.87
MECP2-216ENST00000627864 FAM193BQ96PV7 902 aaPredicted RBP20.46■□□□□ 0.87
MECP2-216ENST00000627864 CNTN3Q9P232 1028 aa20.46■□□□□ 0.87
MECP2-216ENST00000627864 PLAGL2Q9UPG8 496 aa20.46■□□□□ 0.87
MECP2-216ENST00000627864 MYO9BQ13459 2157 aa20.46■□□□□ 0.87
MECP2-216ENST00000627864 IL18RAPO95256 599 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 THP07101 528 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 CA3P07451 260 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 SMAD3P84022 425 aaKnown RBP20.45■□□□□ 0.86
MECP2-216ENST00000627864 GRIK3Q13003 919 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 LRIT3Q3SXY7 679 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 CT47A1Q5JQC4 288 aaPredicted RBP20.45■□□□□ 0.86
MECP2-216ENST00000627864 FOXR2Q6PJQ5 311 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 ZNF280BQ86YH2 543 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 CSGALNACT2Q8N6G5 542 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 ZMAT2Q96NC0 199 aaKnown RBP20.45■□□□□ 0.86
MECP2-216ENST00000627864 MED15Q96RN5 788 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 DNAJC25Q9H1X3 360 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 NKX2-4Q9H2Z4 354 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 ASB7Q9H672 318 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 PDE11AQ9HCR9 933 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 HCSTQ9UBK5 93 aa20.45■□□□□ 0.86
MECP2-216ENST00000627864 MRPL42Q9Y6G3 142 aaKnown RBP20.45■□□□□ 0.86
MECP2-216ENST00000627864 AKAP3O75969 853 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 DDHD2O94830 711 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 KCNE1P15382 129 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 PSMC2P35998 433 aaKnown RBP20.44■□□□□ 0.86
MECP2-216ENST00000627864 WNT7BP56706 349 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 CYP24A1Q07973 514 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 SURF1Q15526 300 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 TPD52L1Q16890 204 aaPredicted RBP20.44■□□□□ 0.86
MECP2-216ENST00000627864 ANO6Q4KMQ2 910 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 JADE1Q6IE81 842 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 ZC3H3Q8IXZ2 948 aaKnown RBP20.44■□□□□ 0.86
MECP2-216ENST00000627864 FAM186BQ8IYM0 893 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 KIF12Q96FN5 646 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 MFSD14AQ96MC6 490 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 PPP1R10Q96QC0 940 aaKnown RBP20.44■□□□□ 0.86
MECP2-216ENST00000627864 FUCA2Q9BTY2 467 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 SRRTQ9BXP5 876 aaKnown RBP20.44■□□□□ 0.86
MECP2-216ENST00000627864 CWH43Q9H720 699 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 NRDE2Q9H7Z3 1164 aa20.44■□□□□ 0.86
MECP2-216ENST00000627864 LINC01553A4QN01 128 aa20.43■□□□□ 0.86
MECP2-216ENST00000627864 CCDC127Q96BQ5 260 aa20.43■□□□□ 0.86
MECP2-216ENST00000627864 CEP63Q96MT8 703 aa20.43■□□□□ 0.86
MECP2-216ENST00000627864 MAPK13O15264 365 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 B4GALT3O60512 393 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms