RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 GLB1LQ6UWU2 654 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 THNSL1Q8IYQ7 743 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 GUF1Q8N442 669 aaKnown RBP16.05■□□□□ 0.16
PNKP-221ENST00000627317 TRIML1Q8N9V2 468 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 GOLGA5Q8TBA6 731 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 HELQQ8TDG4 1101 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 RSPH1Q8WYR4 309 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 RSAD1Q9HA92 442 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 UBN1Q9NPG3 1134 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 PARP2Q9UGN5 583 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 MAPK8IP1Q9UQF2 711 aa16.05■□□□□ 0.16
PNKP-221ENST00000627317 A0A0B4J269 797 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 OGTO15294 1046 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 FGF18O76093 207 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 RECQL4O94761 1208 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 GARTP22102 1010 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 GRM5P41594 1212 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 OSTNP61366 133 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 UBE3AQ05086 875 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 HYAL1Q12794 435 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 MORC3Q14149 939 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 KYAT1Q16773 422 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 AAK1Q2M2I8 961 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 AGMOQ6ZNB7 445 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 CEP120Q8N960 986 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 URGCPQ8TCY9 931 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 ADAMTS19Q8TE59 1207 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 PABPC5Q96DU9 382 aaKnown RBP16.04■□□□□ 0.16
PNKP-221ENST00000627317 HAPLN2Q9GZV7 340 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 RNF39Q9H2S5 420 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 AGPAT3Q9NRZ7 376 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 SNTG2Q9NY99 539 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 CGNQ9P2M7 1197 aaKnown RBP16.04■□□□□ 0.16
PNKP-221ENST00000627317 AGO2Q9UKV8 859 aaKnown RBP16.04■□□□□ 0.16
PNKP-221ENST00000627317 INPP5FQ9Y2H2 1132 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 PCDHB12Q9Y5F1 795 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 STYXL1Q9Y6J8 313 aa16.04■□□□□ 0.16
PNKP-221ENST00000627317 FSCN2O14926 492 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 INPPL1O15357 1258 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 B4GALT3O60512 393 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 OFD1O75665 1012 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 AKAP5P24588 427 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 LTBRP36941 435 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 PBX3P40426 434 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 PPP1R2P41236 205 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 YARSP54577 528 aaKnown RBP16.03■□□□□ 0.16
PNKP-221ENST00000627317 SNRPFP62306 86 aaKnown RBP16.03■□□□□ 0.16
PNKP-221ENST00000627317 PLCB3Q01970 1234 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 KLHL40Q2TBA0 621 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 LEXMQ3ZCV2 418 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 CAVIN1Q6NZI2 390 aaKnown RBP16.03■□□□□ 0.16
PNKP-221ENST00000627317 KCNT2Q6UVM3 1135 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 ADGRD2Q7Z7M1 963 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 NOC3LQ8WTT2 800 aaKnown RBP16.03■□□□□ 0.16
PNKP-221ENST00000627317 POF1BQ8WVV4 589 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 RPS6KC1Q96S38 1066 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 CBWD1Q9BRT8 395 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 MRPL9Q9BYD2 267 aaKnown RBP16.03■□□□□ 0.16
PNKP-221ENST00000627317 AAASQ9NRG9 546 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 TOPORSQ9NS56 1045 aaPredicted RBP16.03■□□□□ 0.16
PNKP-221ENST00000627317 LZTS1Q9Y250 596 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 GIT1Q9Y2X7 761 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 PCDHGC5Q9Y5F6 944 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 PLXNA4Q9HCM2 1894 aa16.03■□□□□ 0.16
PNKP-221ENST00000627317 PSMA7O14818 248 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 KIAA0391O15091 583 aaKnown RBP16.02■□□□□ 0.16
PNKP-221ENST00000627317 TGFB1I1O43294 461 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 CLTAP09496 248 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 KCNA5P22460 613 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 ADSSP30520 456 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 GTF2F1P35269 517 aaKnown RBP eCLIP16.02■□□□□ 0.167e-8■■■□□ 17.9
PNKP-221ENST00000627317 MLH1P40692 756 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 PRCPP42785 496 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 CYP2J2P51589 502 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 AFF1P51825 1210 aaKnown RBP16.02■□□□□ 0.16
PNKP-221ENST00000627317 SKOR2Q2VWA4 1001 aaPredicted RBP16.02■□□□□ 0.16
PNKP-221ENST00000627317 SEZ6Q53EL9 994 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 COBLL1Q53SF7 1204 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 NOMO2Q5JPE7 1267 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 SLC39A11Q8N1S5 342 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 SAAL1Q96ER3 474 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 ZNF558Q96NG5 402 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 ACAP3Q96P50 834 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 GAD1Q99259 594 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 KCTD10Q9H3F6 313 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 PCIF1Q9H4Z3 704 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 TBC1D13Q9NVG8 400 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 KLK14Q9P0G3 267 aa16.02■□□□□ 0.16
PNKP-221ENST00000627317 MYO7AQ13402 2215 aa16.01■□□□□ 0.15
PNKP-221ENST00000627317 ARL5CA6NH57 179 aa16.01■□□□□ 0.15
PNKP-221ENST00000627317 PDXKO00764 312 aa16.01■□□□□ 0.15
PNKP-221ENST00000627317 CLIC2O15247 247 aa16.01■□□□□ 0.15
PNKP-221ENST00000627317 CALUO43852 315 aaPredicted RBP16.01■□□□□ 0.15
PNKP-221ENST00000627317 PPM1AP35813 382 aa16.01■□□□□ 0.15
PNKP-221ENST00000627317 HSP90AA2PQ14568 343 aaPredicted RBP16.01■□□□□ 0.15
PNKP-221ENST00000627317 NFKBIBQ15653 356 aa16.01■□□□□ 0.15
PNKP-221ENST00000627317 SPOUT1Q5T280 376 aaKnown RBP16.01■□□□□ 0.15
PNKP-221ENST00000627317 TMEM173Q86WV6 379 aaPredicted RBP16.01■□□□□ 0.15
PNKP-221ENST00000627317 ADSSL1Q8N142 457 aa16.01■□□□□ 0.15
PNKP-221ENST00000627317 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms