RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 DNAAF5Q86Y56 855 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 CENPTQ96BT3 561 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 CCDC97Q96F63 343 aaPredicted RBP18.75■□□□□ 0.59
FARP1-242ENST00000627049 CHORDC1Q9UHD1 332 aaPredicted RBP18.75■□□□□ 0.59
FARP1-242ENST00000627049 MID2Q9UJV3 735 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 JCADQ9P266 1359 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 PALM3A6NDB9 673 aaPredicted RBP18.75■□□□□ 0.59
FARP1-242ENST00000627049 RPA1P27694 616 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 PDZD8Q8NEN9 1154 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 LXNQ9BS40 222 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 TLK1Q9UKI8 766 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 LMTK3Q96Q04 1460 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 FGFR2P21802 821 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 KCNQ4P56696 695 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 LRRC36Q1X8D7 754 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 THTPAQ9BU02 230 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 OSBPL8Q9BZF1 889 aa18.75■□□□□ 0.59
FARP1-242ENST00000627049 ALDH5A1P51649 535 aaPredicted RBP18.74■□□□□ 0.59
FARP1-242ENST00000627049 ZC2HC1CQ53FD0 456 aaPredicted RBP18.74■□□□□ 0.59
FARP1-242ENST00000627049 ATXN2LQ8WWM7 1075 aaKnown RBP18.74■□□□□ 0.59
FARP1-242ENST00000627049 KIAA1586Q9HCI6 787 aa18.74■□□□□ 0.59
FARP1-242ENST00000627049 SRP68Q9UHB9 627 aaKnown RBP18.74■□□□□ 0.59
FARP1-242ENST00000627049 GNA15P30679 374 aa18.74■□□□□ 0.59
FARP1-242ENST00000627049 KPNB1Q14974 876 aaKnown RBP18.74■□□□□ 0.59
FARP1-242ENST00000627049 ZNF394Q53GI3 561 aa18.74■□□□□ 0.59
FARP1-242ENST00000627049 NLRP9Q7RTR0 991 aa18.74■□□□□ 0.59
FARP1-242ENST00000627049 HAUS6Q7Z4H7 955 aa18.74■□□□□ 0.59
FARP1-242ENST00000627049 FAM213AQ9BRX8 229 aa18.74■□□□□ 0.59
FARP1-242ENST00000627049 PI4K2BG5E9Z4 385 aa18.74■□□□□ 0.59
FARP1-242ENST00000627049 CAPN9O14815 690 aa18.74■□□□□ 0.59
FARP1-242ENST00000627049 PICK1Q9NRD5 415 aa18.74■□□□□ 0.59
FARP1-242ENST00000627049 DDX56Q9NY93 547 aaKnown RBP18.74■□□□□ 0.59
FARP1-242ENST00000627049 P4HBP07237 508 aaKnown RBP18.74■□□□□ 0.59
FARP1-242ENST00000627049 TMEM117Q9H0C3 514 aa18.74■□□□□ 0.59
FARP1-242ENST00000627049 WHRNQ9P202 907 aa18.74■□□□□ 0.59
FARP1-242ENST00000627049 DIP2AQ14689 1571 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 EIF3DO15371 548 aaKnown RBP eCLIP18.73■□□□□ 0.596e-10■□□□□ 10.6
FARP1-242ENST00000627049 MIGA2Q7L4E1 593 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 ANKRD36BP1Q96IX9 119 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 TNS3Q68CZ2 1445 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 DENND3A2RUS2 1198 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 HNRNPCP07910 306 aaKnown RBP eCLIP18.73■□□□□ 0.595e-7■■■□□ 16.9
FARP1-242ENST00000627049 KRT7P08729 469 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 ALDH18A1P54886 795 aaKnown RBP18.73■□□□□ 0.59
FARP1-242ENST00000627049 CENPCQ03188 943 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 SPDYCQ5MJ68 293 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 ERMARDQ5T6L9 678 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 NRBP2Q9NSY0 501 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 RIPK2O43353 540 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 THOC5Q13769 683 aaKnown RBP18.73■□□□□ 0.59
FARP1-242ENST00000627049 MDH1BQ5I0G3 518 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 RCOR2Q8IZ40 523 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 SCFD1Q8WVM8 642 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 PFDN4Q9NQP4 134 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 PARVAQ9NVD7 372 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 MIIPQ5JXC2 388 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 OR6B2Q6IFH4 312 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 FAM118BQ9BPY3 351 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 GINS2Q9Y248 185 aa18.73■□□□□ 0.59
FARP1-242ENST00000627049 K7ERI5 159 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 SLFN12LQ6IEE8 588 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 DNAAF3Q8N9W5 541 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 MANSC1Q9H8J5 431 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 GTF3C4Q9UKN8 822 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 TMEM131LA2VDJ0 1609 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 AGPSO00116 658 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 FOXN3O00409 490 aaPredicted RBP18.72■□□□□ 0.59
FARP1-242ENST00000627049 STX1BP61266 288 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 ZBTB17Q13105 803 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 EPHA7Q15375 998 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 AGAP11Q8TF27 550 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 MSTO1Q9BUK6 570 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 SLC9A2Q9UBY0 812 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 HNRNPH3P31942 346 aaKnown RBP18.72■□□□□ 0.59
FARP1-242ENST00000627049 RARS2Q5T160 578 aaKnown RBP18.72■□□□□ 0.59
FARP1-242ENST00000627049 CATSPER3Q86XQ3 398 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 CCNYQ8ND76 341 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 F5H6K3 240 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 KLRC3Q07444 240 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 ABCF3Q9NUQ8 709 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 HSPBP1Q9NZL4 362 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 TSPOAP1O95153 1857 aa18.72■□□□□ 0.59
FARP1-242ENST00000627049 OPLAHO14841 1288 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 KLRC4O43908 158 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 LDHAP00338 332 aaKnown RBP18.71■□□□□ 0.59
FARP1-242ENST00000627049 SCARA5Q6ZMJ2 495 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 C16orf86Q6ZW13 317 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 FBXO33Q7Z6M2 555 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 HIC2Q96JB3 615 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 KLF6Q99612 283 aaPredicted RBP18.71■□□□□ 0.59
FARP1-242ENST00000627049 HAUS8Q9BT25 410 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 UPF3AQ9H1J1 476 aaKnown RBP18.71■□□□□ 0.59
FARP1-242ENST00000627049 STRIP2Q9ULQ0 834 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 QARSP47897 775 aaKnown RBP18.71■□□□□ 0.59
FARP1-242ENST00000627049 MTERF2Q49AM1 385 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 NT5DC3Q86UY8 548 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 CPA5Q8WXQ8 436 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 ACAP3Q96P50 834 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 KLHL11Q9NVR0 708 aa18.71■□□□□ 0.59
FARP1-242ENST00000627049 PREX1Q8TCU6 1659 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms