RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 TRIM17Q9Y577 477 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 SCN10AQ9Y5Y9 1956 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 SOWAHDA6NJG2 315 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 LRRC53A6NM62 1247 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 FAM189A1O60320 539 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 TSPAN1O60635 241 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 CSDE1O75534 798 aaKnown RBP7.58□□□□□ -1.2
CBWD3-219ENST00000622817 DARSP14868 501 aaKnown RBP7.58□□□□□ -1.2
CBWD3-219ENST00000622817 HSPA6P17066 643 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 ARF4P18085 180 aaPredicted RBP7.58□□□□□ -1.2
CBWD3-219ENST00000622817 AP3M2P53677 418 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 POU5F1Q01860 360 aaKnown RBP7.58□□□□□ -1.2
CBWD3-219ENST00000622817 APBA1Q02410 837 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 TMEM62Q0P6H9 643 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 ZBTB41Q5SVQ8 909 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 EEF1DP3Q658K8 133 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 E4F1Q66K89 784 aaPredicted RBP7.58□□□□□ -1.2
CBWD3-219ENST00000622817 WDR59Q6PJI9 974 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 FMNL3Q8IVF7 1028 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 BRSK2Q8IWQ3 736 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 FBXL13Q8NEE6 735 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 LMO3Q8TAP4 145 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 VTI1AQ96AJ9 217 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 SPAG5Q96R06 1193 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 POP1Q99575 1024 aaKnown RBP7.58□□□□□ -1.2
CBWD3-219ENST00000622817 CGRRF1Q99675 332 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 TSEN34Q9BSV6 310 aaKnown RBP7.58□□□□□ -1.2
CBWD3-219ENST00000622817 STK33Q9BYT3 514 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 CDT1Q9H211 546 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 PDZD7Q9H5P4 517 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 PDE11AQ9HCR9 933 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 RRAGDQ9NQL2 400 aaPredicted RBP7.58□□□□□ -1.2
CBWD3-219ENST00000622817 CPSF3Q9UKF6 684 aaKnown RBP7.58□□□□□ -1.2
CBWD3-219ENST00000622817 COQ4Q9Y3A0 265 aa7.58□□□□□ -1.2
CBWD3-219ENST00000622817 A0A1B0GUA9 196 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 MOXD2PA6NHM9 499 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 M0QZ92 97 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 CLTAP09496 248 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 TNNI1P19237 187 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 EIF4BP23588 611 aaKnown RBP7.57□□□□□ -1.2
CBWD3-219ENST00000622817 AXLP30530 894 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 CLCN1P35523 988 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 CYLC1P35663 651 aaPredicted RBP7.57□□□□□ -1.2
CBWD3-219ENST00000622817 PBX2P40425 430 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 ACLYP53396 1101 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 CRYBB1P53674 252 aaPredicted RBP7.57□□□□□ -1.2
CBWD3-219ENST00000622817 PTPN11Q06124 597 aaPredicted RBP7.57□□□□□ -1.2
CBWD3-219ENST00000622817 RAPGEF1Q13905 1077 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 DCAF4L1Q3SXM0 396 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 FAM47CQ5HY64 1035 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 RAD9BQ6WBX8 426 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 C15orf39Q6ZRI6 1047 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 TOGARAM2Q6ZUX3 1019 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 SV2AQ7L0J3 742 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 CATSPER4Q7RTX7 472 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 SERINC5Q86VE9 423 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 CCDC170Q8IYT3 715 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 ARRDC4Q8NCT1 418 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 OSMRQ99650 979 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 CHP1Q99653 195 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 ADPGKQ9BRR6 497 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 AIPL1Q9NZN9 384 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 APEX2Q9UBZ4 518 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 GINS2Q9Y248 185 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 FHOD1Q9Y613 1164 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 PTCH2Q9Y6C5 1203 aa7.57□□□□□ -1.2
CBWD3-219ENST00000622817 GOLGA6L9A6NEM1 432 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 ZC3H11AO75152 810 aaKnown RBP eCLIP7.56□□□□□ -1.2
CBWD3-219ENST00000622817 IL18RAPO95256 599 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 SERPING1P05155 500 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 CCDC175P0C221 793 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 TNFSF9P41273 254 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 STAT1P42224 750 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 JAM2P57087 298 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 MRPS6P82932 125 aaKnown RBP7.56□□□□□ -1.2
CBWD3-219ENST00000622817 MTF1Q14872 753 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 SNX17Q15036 470 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 ASIC2Q16515 512 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 ZACNQ401N2 412 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 SLC9C1Q4G0N8 1177 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 SEZ6Q53EL9 994 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 IQCEQ6IPM2 695 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 GDF6Q6KF10 455 aaPredicted RBP7.56□□□□□ -1.2
CBWD3-219ENST00000622817 RPAINQ86UA6 219 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 WDR49Q8IV35 697 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 THNSL1Q8IYQ7 743 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 ZNF516Q92618 1163 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 CPB2Q96IY4 423 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 CCDC42Q96M95 316 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 CELF4Q9BZC1 486 aaKnown RBP7.56□□□□□ -1.2
CBWD3-219ENST00000622817 NHEJ1Q9H9Q4 299 aaPredicted RBP7.56□□□□□ -1.2
CBWD3-219ENST00000622817 RPF1Q9H9Y2 349 aaKnown RBP7.56□□□□□ -1.2
CBWD3-219ENST00000622817 CDHR5Q9HBB8 845 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 TOPORSQ9NS56 1045 aaPredicted RBP7.56□□□□□ -1.2
CBWD3-219ENST00000622817 RAB20Q9NX57 234 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 WBP1LQ9NX94 342 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 TRMT1Q9NXH9 659 aaKnown RBP7.56□□□□□ -1.2
CBWD3-219ENST00000622817 TSKSQ9UJT2 592 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 DNAJC12Q9UKB3 198 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 PTPN22Q9Y2R2 807 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms