RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 KIAA2013Q8IYS2 634 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 PJA1Q8NG27 643 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 BSNDQ8WZ55 320 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 CLSTN3Q9BQT9 956 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 PDZD7Q9H5P4 517 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 SNTG2Q9NY99 539 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.13□□□□□ -0.473e-8■■■■□ 21.6
LINC00963-214ENST00000622680 POLIQ9UNA4 740 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 SCN1AP35498 2009 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 KMT2BQ9UMN6 2715 aaPredicted RBP12.12□□□□□ -0.47
LINC00963-214ENST00000622680 KIAA1549LQ6ZVL6 1849 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 BTBD18B2RXH4 712 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
LINC00963-214ENST00000622680 C8AP07357 584 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 SP9P0CG40 484 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 LIG1P18858 919 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 IGFBP6P24592 240 aaPredicted RBP12.12□□□□□ -0.47
LINC00963-214ENST00000622680 GPC5P78333 572 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 CREMQ03060 361 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 NAB2Q15742 525 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 TMEM132AQ24JP5 1023 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 PPM1LQ5SGD2 360 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 LIN9Q5TKA1 542 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 CDCA2Q69YH5 1023 aaPredicted RBP12.12□□□□□ -0.47
LINC00963-214ENST00000622680 PHLDB3Q6NSJ2 640 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 ERMP1Q7Z2K6 904 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 NOSTRINQ8IVI9 506 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 PIK3R5Q8WYR1 880 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 NXPE3Q969Y0 559 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 RMDN1Q96DB5 314 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 HINFPQ9BQA5 517 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 KXD1Q9BQD3 176 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 TTPALQ9BTX7 342 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 TMEM60Q9H2L4 133 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 BRMS1Q9HCU9 246 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 SLC2A4RGQ9NR83 387 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 HCFC1R1Q9NWW0 138 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 SIT1Q9Y3P8 196 aa12.12□□□□□ -0.47
LINC00963-214ENST00000622680 CNOT1A5YKK6 2376 aaKnown RBP12.12□□□□□ -0.47
LINC00963-214ENST00000622680 JAK2O60674 1132 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 MED24O75448 989 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 SPATA31C1P0DKV0 1188 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 SNW1Q13573 536 aaKnown RBP12.11□□□□□ -0.47
LINC00963-214ENST00000622680 GLRA4Q5JXX5 417 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 EEF1DP3Q658K8 133 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 ZBTB8OSQ8IWT0 167 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 DIS3L2Q8IYB7 885 aaKnown RBP12.11□□□□□ -0.47
LINC00963-214ENST00000622680 GPR65Q8IYL9 337 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 ITFG1Q8TB96 612 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 LNX1Q8TBB1 728 aaPredicted RBP12.11□□□□□ -0.47
LINC00963-214ENST00000622680 SLC7A14Q8TBB6 771 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 ING5Q8WYH8 240 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 WASF1Q92558 559 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 FGF13Q92913 245 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 PRIMPOLQ96LW4 560 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 MTMR9Q96QG7 549 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 PRMT7Q9NVM4 692 aaPredicted RBP12.11□□□□□ -0.47
LINC00963-214ENST00000622680 CDH7Q9ULB5 785 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 GDAQ9Y2T3 454 aa12.11□□□□□ -0.47
LINC00963-214ENST00000622680 MED19A0JLT2 244 aaPredicted RBP12.1□□□□□ -0.47
LINC00963-214ENST00000622680 N4BP3O15049 544 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 C1RP00736 705 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 PRKCBP05771 671 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 ATP2B1P20020 1258 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 PRPF4BQ13523 1007 aaKnown RBP12.1□□□□□ -0.47
LINC00963-214ENST00000622680 ME3Q16798 604 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 C1orf210Q8IVY1 113 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 MAML2Q8IZL2 1156 aaPredicted RBP12.1□□□□□ -0.47
LINC00963-214ENST00000622680 DCLK2Q8N568 766 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 NSUN7Q8NE18 718 aaKnown RBP12.1□□□□□ -0.47
LINC00963-214ENST00000622680 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 KIFC3Q9BVG8 833 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 CCDC113Q9H0I3 377 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 FZD8Q9H461 694 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 GOLGA2P5Q9HBQ8 144 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 POLD4Q9HCU8 107 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 MTF2Q9Y483 593 aaPredicted RBP12.1□□□□□ -0.47
LINC00963-214ENST00000622680 LAMA1P25391 3075 aa12.1□□□□□ -0.47
LINC00963-214ENST00000622680 I3L4J1 428 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 THP07101 528 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 HNRNPA1P09651 372 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00963-214ENST00000622680 CD72P21854 359 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 MCM7P33993 719 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 OR1D2P34982 312 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 STARD6P59095 220 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 UBXN2BQ14CS0 331 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 MLF2Q15773 248 aaPredicted RBP12.09□□□□□ -0.47
LINC00963-214ENST00000622680 FAM187BQ17R55 369 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 AXDND1Q5T1B0 1012 aaPredicted RBP12.09□□□□□ -0.47
LINC00963-214ENST00000622680 ZC3H14Q6PJT7 736 aaKnown RBP12.09□□□□□ -0.47
LINC00963-214ENST00000622680 CATSPER3Q86XQ3 398 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 NPAS3Q8IXF0 933 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 C3orf58Q8NDZ4 430 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 MCPH1Q8NEM0 835 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 SEMA4AQ9H3S1 761 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 CDY1Q9Y6F8 540 aa12.09□□□□□ -0.47
LINC00963-214ENST00000622680 ZFP37Q9Y6Q3 630 aaPredicted RBP12.09□□□□□ -0.47
LINC00963-214ENST00000622680 HELZP42694 1942 aaKnown RBP12.09□□□□□ -0.47
LINC00963-214ENST00000622680 ANAPC1Q9H1A4 1944 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms